Difference between revisions of "ExchangeSeed-CPD-315"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 2.5.1.32-RXN == * direction: ** left-to-right * synonymous: ** psase ** geranylgeranyl-diphosphate geranylgeranyltransferase == Reaction form...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CPD-315 == * direction: ** reversible == Reaction formula == * 1.0 CPD-315[C-BOUNDARY] '''<=>''' 1.0 CPD-315[e] == Gene(...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.5.1.32-RXN ==
+
== Reaction ExchangeSeed-CPD-315 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* synonymous:
 
−
** psase
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c]
+
* 1.0 [[CPD-315]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-315]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18355]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6287]], neurosporene biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7943]], lycopadiene biosynthesis:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR102655
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: nb gene associated=0}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297]
+
{{#set: nb pathway associated=0}}
−
* LIGAND-RXN:
+
{{#set: reconstruction category=manual}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
+
{{#set: reconstruction tool=curation}}
−
* UNIPROT:
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
** [http://www.uniprot.org/uniprot/P53609 P53609]
+
{{#set: reconstruction source=import_from_medium}}
−
** [http://www.uniprot.org/uniprot/P37295 P37295]
 
−
** [http://www.uniprot.org/uniprot/P22872 P22872]
 
−
** [http://www.uniprot.org/uniprot/P53610 P53610]
 
−
** [http://www.uniprot.org/uniprot/P53612 P53612]
 
−
** [http://www.uniprot.org/uniprot/P17056 P17056]
 
−
** [http://www.uniprot.org/uniprot/P49293 P49293]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: synonymous=psase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=ectocarpus_subulatus}}
 

Latest revision as of 19:41, 17 March 2021

Reaction ExchangeSeed-CPD-315

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=ExchangeSeed-CPD-315&oldid=52479"