Difference between revisions of "ExchangeSeed-PPI"

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(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * common-name: ** cis-aconitate hydratase ** d-threo-isocitrate hydro-lyase (cis-aconitate-forming) * direction: ** reve...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-PPI == * direction: ** reversible == Reaction formula == * 1.0 PPI[C-BOUNDARY] '''<=>''' 1.0 PPI[e] == Gene(s) associate...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ACONITATEHYDR-RXN ==
+
== Reaction ExchangeSeed-PPI ==
* common-name:
 
** cis-aconitate hydratase
 
** d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
+
* 1.0 [[PPI]][C-BOUNDARY] '''<=>''' 1.0 [[PPI]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_20171]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** '''5''' reactions found over '''12''' reactions in the full pathway
 
** '''5''' reactions found over '''12''' reactions in the full pathway
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''8''' reactions found over '''10''' reactions in the full pathway
 
** '''8''' reactions found over '''10''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
** '''10''' reactions found over '''16''' reactions in the full pathway
 
** '''10''' reactions found over '''16''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''12''' reactions found over '''18''' reactions in the full pathway
 
** '''12''' reactions found over '''18''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* DB : RHEA
 
* ID : 22144
 
{{#set: common-name=d-threo-isocitrate hydro-lyase (cis-aconitate-forming)|cis-aconitate hydratase}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=import_from_medium}}

Latest revision as of 19:41, 17 March 2021

Reaction ExchangeSeed-PPI

  • direction:
    • reversible

Reaction formula

  • 1.0 PPI[C-BOUNDARY] <=> 1.0 PPI[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links