Difference between revisions of "1.14.11.2-RXN"

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(Created page with "Category:reaction == Reaction RXNARA-8002 == * direction: ** left-to-right * synonymous: ** psase ** geranylgeranyl-diphosphate geranylgeranyltransferase ** prephytoene-di...")
(Created page with "Category:reaction == Reaction 1.14.11.2-RXN == * common-name: ** prolyl 4-hydroxylase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.2 ec-1.14.11.2] * direction: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXNARA-8002 ==
+
== Reaction 1.14.11.2-RXN ==
 +
* common-name:
 +
** prolyl 4-hydroxylase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.14.11.2 ec-1.14.11.2]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** psase
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
−
** prephytoene-diphosphate synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-464]][c] '''=>''' 1 [[CPD-12321]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROCOLLAGEN-L-PROLINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-6321]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18355]]
+
* Gene: [[E_subulatus_17536]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16982]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16980]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_02339]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_17537]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16981]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
+
* [[PWY-7894]], procollagen hydroxylation and glycosylation:
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6287]], neurosporene biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5942]], trans-lycopene biosynthesis I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR108741
+
* METANETX-RXN : MNXR114916
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34480 34480]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18946 18946]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07270 R07270]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21195 P21195]
 +
** [http://www.uniprot.org/uniprot/Q10576 Q10576]
 +
** [http://www.uniprot.org/uniprot/P16924 P16924]
 +
** [http://www.uniprot.org/uniprot/P13674 P13674]
 +
** [http://www.uniprot.org/uniprot/P05307 P05307]
 +
** [http://www.uniprot.org/uniprot/P09102 P09102]
 +
** [http://www.uniprot.org/uniprot/P07237 P07237]
 +
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 +
** [http://www.uniprot.org/uniprot/P04785 P04785]
 +
** [http://www.uniprot.org/uniprot/P54001 P54001]
 +
{{#set: common-name=prolyl 4-hydroxylase}}
 +
{{#set: ec-number=ec-1.14.11.2}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=psase|geranylgeranyl-diphosphate geranylgeranyltransferase|prephytoene-diphosphate synthase}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:37, 17 March 2021

Reaction 1.14.11.2-RXN

  • common-name:
    • prolyl 4-hydroxylase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7894, procollagen hydroxylation and glycosylation:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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