Difference between revisions of "LYSINE--TRNA-LIGASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-16616 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1...") |
(Created page with "Category:reaction == Reaction LYSINE--TRNA-LIGASE-RXN == * common-name: ** lysine—trna ligase ** lysine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1....") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction LYSINE--TRNA-LIGASE-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** lysine—trna ligase |
+ | ** lysine-trna ligase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.1.1.6 ec-6.1.1.6] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[E_subulatus_18715]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_15900]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_18716]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_16816]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_18713]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_18712]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | * Gene: [[E_subulatus_18714]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[TRNA-CHARGING-PWY]], tRNA charging: |
− | ** ''' | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * METANETX-RXN : MNXR116033 |
− | {{#set: ec-number=ec- | + | * RHEA: |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20793 20793] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P41258 P41258] | ||
+ | ** [http://www.uniprot.org/uniprot/P46861 P46861] | ||
+ | ** [http://www.uniprot.org/uniprot/P47382 P47382] | ||
+ | ** [http://www.uniprot.org/uniprot/O57963 O57963] | ||
+ | ** [http://www.uniprot.org/uniprot/O51603 O51603] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7] | ||
+ | ** [http://www.uniprot.org/uniprot/O83650 O83650] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X231 Q9X231] | ||
+ | ** [http://www.uniprot.org/uniprot/P43825 P43825] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8] | ||
+ | ** [http://www.uniprot.org/uniprot/O84786 O84786] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7] | ||
+ | ** [http://www.uniprot.org/uniprot/P56126 P56126] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8] | ||
+ | ** [http://www.uniprot.org/uniprot/O67258 O67258] | ||
+ | ** [http://www.uniprot.org/uniprot/O84002 O84002] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9] | ||
+ | ** [http://www.uniprot.org/uniprot/P32048 P32048] | ||
+ | ** [http://www.uniprot.org/uniprot/P37879 P37879] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48986 Q48986] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7] | ||
+ | ** [http://www.uniprot.org/uniprot/P37477 P37477] | ||
+ | ** [http://www.uniprot.org/uniprot/P75500 P75500] | ||
+ | ** [http://www.uniprot.org/uniprot/P95970 P95970] | ||
+ | ** [http://www.uniprot.org/uniprot/P73443 P73443] | ||
+ | ** [http://www.uniprot.org/uniprot/P15180 P15180] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43776 Q43776] | ||
+ | ** [http://www.uniprot.org/uniprot/O74059 O74059] | ||
+ | ** [http://www.uniprot.org/uniprot/O30522 O30522] | ||
+ | </div> | ||
+ | {{#set: common-name=lysine—trna ligase|lysine-trna ligase}} | ||
+ | {{#set: ec-number=ec-6.1.1.6}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=7}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} |
Latest revision as of 19:37, 17 March 2021
Contents
Reaction LYSINE--TRNA-LIGASE-RXN
- common-name:
- lysine—trna ligase
- lysine-trna ligase
- ec-number:
- direction:
- left-to-right
Reaction formula
Gene(s) associated with this reaction
- Gene: E_subulatus_18715
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_15900
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18716
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_16816
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18713
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18712
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_18714
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links