Difference between revisions of "1.1.1.271-RXN"

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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62] * dir...")
 
(Created page with "Category:reaction == Reaction 1.1.1.271-RXN == * common-name: ** gdp-l-fucose synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.271 ec-1.1.1.271] * direction: **...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DAPASYN-RXN ==
+
== Reaction 1.1.1.271-RXN ==
 
* common-name:
 
* common-name:
−
** 7,8-diaminopelargonic acid synthase
+
** gdp-l-fucose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
+
** [http://enzyme.expasy.org/EC/1.1.1.271 ec-1.1.1.271]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
+
* 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13118]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18708]]
+
* Gene: [[E_subulatus_07773]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01075]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_07774]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_19816]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
* METANETX-RXN : MNXR100108
−
* ID : 16861
+
* RHEA:
−
{{#set: common-name=7,8-diaminopelargonic acid synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18887 18887]
−
{{#set: ec-number=ec-2.6.1.62}}
+
* LIGAND-RXN:
−
{{#set: direction=reversible}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=gdp-l-fucose synthase}}
−
{{#set: nb pathway associated=1}}
+
{{#set: ec-number=ec-1.1.1.271}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction 1.1.1.271-RXN

  • common-name:
    • gdp-l-fucose synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR100108
  • RHEA:
  • LIGAND-RXN:





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