Difference between revisions of "3.5.1.52-RXN"

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(Created page with "Category:reaction == Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN == * common-name: ** 3-hydroxyisobutyrate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1...")
(Created page with "Category:reaction == Reaction PROTEIN-ARGININE-DEIMINASE-RXN == * common-name: ** protein-arginine deiminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN ==
+
== Reaction PROTEIN-ARGININE-DEIMINASE-RXN ==
 
* common-name:
 
* common-name:
−
** 3-hydroxyisobutyrate dehydrogenase
+
** protein-arginine deiminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.31 ec-1.1.1.31]
+
** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3.15]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12175]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Protein-L-Arginines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTEIN-L-CITRULLINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_09945]]
+
* Gene: [[E_subulatus_03928]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_02116]]
+
* Gene: [[E_subulatus_03927]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_05762]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[PWY-4921]], protein citrullination:
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : LIGAND-RXN
+
* METANETX-RXN : MNXR107622
−
* ID : R02047
+
* RHEA:
−
{{#set: common-name=3-hydroxyisobutyrate dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18090 18090]
−
{{#set: ec-number=ec-1.1.1.31}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q08642 Q08642]
 +
** [http://www.uniprot.org/uniprot/P20717 P20717]
 +
** [http://www.uniprot.org/uniprot/P70708 P70708]
 +
{{#set: common-name=protein-arginine deiminase}}
 +
{{#set: ec-number=ec-3.5.3.15}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:17, 15 March 2021

Reaction PROTEIN-ARGININE-DEIMINASE-RXN

  • common-name:
    • protein-arginine deiminase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4921, protein citrullination:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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