Difference between revisions of "RXN-15117"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-2161 == * common-name: ** l-serine:trnasec ligase (amp-forming) ** serine-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1...")
(Created page with "Category:reaction == Reaction DOLICHOL-KINASE-RXN == * common-name: ** dolichol kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.108 ec-2.7.1.108] * direction: **...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-2161 ==
+
== Reaction DOLICHOL-KINASE-RXN ==
 
* common-name:
 
* common-name:
** l-serine:trnasec ligase (amp-forming)
+
** dolichol kinase
** serine-trna ligase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
+
** [http://enzyme.expasy.org/EC/2.7.1.108 ec-2.7.1.108]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[tRNA-Sec]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-seryl-SEC-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CTP]][c] '''+''' 1 [[DOLICHOL]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_17805]]
+
* Gene: [[E_subulatus_20401]]
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_18289]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[E_subulatus_18290]]
+
* Gene: [[E_subulatus_20402]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-6129]], dolichol and dolichyl phosphate biosynthesis:
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* DB : LIGAND-RXN
+
* METANETX-RXN : MNXR106791
* ID : R08218
+
* RHEA:
{{#set: common-name=serine-trna ligase|l-serine:trnasec ligase (amp-forming)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13134 13134]
{{#set: ec-number=ec-6.1.1.11}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01018 R01018]
 +
{{#set: common-name=dolichol kinase}}
 +
{{#set: ec-number=ec-2.7.1.108}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:19, 15 March 2021

Reaction DOLICHOL-KINASE-RXN

  • common-name:
    • dolichol kinase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6129, dolichol and dolichyl phosphate biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR106791
  • RHEA:
  • LIGAND-RXN: