Difference between revisions of "TransportSeed-CU+2"

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(Created page with "Category:reaction == Reaction ADENPRIBOSYLTRAN-RXN == * common-name: ** adenine phosphoribosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]...")
(Created page with "Category:reaction == Reaction RXN-16027 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.46 ec-2.4.1.46] * direction: ** reversible == Reaction formula == * 1 CPD-1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENPRIBOSYLTRAN-RXN ==
+
== Reaction RXN-16027 ==
−
* common-name:
 
−
** adenine phosphoribosyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
+
** [http://enzyme.expasy.org/EC/2.4.1.46 ec-2.4.1.46]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[CPD-17272]][c] '''<=>''' 1 [[CPD-2187]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[E_subulatus_11709]]
+
* Gene: [[E_subulatus_16126]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11708]]
+
* Gene: [[E_subulatus_16125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11707]]
+
* Gene: [[E_subulatus_10095]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11704]]
+
* Gene: [[E_subulatus_16121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_09249]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_11706]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_11705]]
+
* Gene: [[E_subulatus_16123]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16124]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16122]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7807]], glyphosate degradation III:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6610]], adenine salvage:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6605]], adenine and adenosine salvage II:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P121-PWY]], adenine and adenosine salvage I:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7805]], (aminomethyl)phosphonate degradation:
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR119784
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* METANETX-RXN : MNXR95482
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{{#set: ec-number=ec-2.4.1.46}}
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609]
+
{{#set: nb gene associated=8}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190]
+
{{#set: reconstruction category=annotation}}
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* UNIPROT:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/P12426 P12426]
 
−
** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4]
 
−
** [http://www.uniprot.org/uniprot/P47202 P47202]
 
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** [http://www.uniprot.org/uniprot/O34443 O34443]
 
−
** [http://www.uniprot.org/uniprot/O25296 O25296]
 
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** [http://www.uniprot.org/uniprot/P47518 P47518]
 
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** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06]
 
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** [http://www.uniprot.org/uniprot/P43856 P43856]
 
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** [http://www.uniprot.org/uniprot/O51718 O51718]
 
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** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9]
 
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** [http://www.uniprot.org/uniprot/P69503 P69503]
 
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** [http://www.uniprot.org/uniprot/P07741 P07741]
 
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** [http://www.uniprot.org/uniprot/P08030 P08030]
 
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** [http://www.uniprot.org/uniprot/P31166 P31166]
 
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** [http://www.uniprot.org/uniprot/P36973 P36973]
 
−
** [http://www.uniprot.org/uniprot/P52561 P52561]
 
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** [http://www.uniprot.org/uniprot/Q42563 Q42563]
 
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** [http://www.uniprot.org/uniprot/Q49639 Q49639]
 
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** [http://www.uniprot.org/uniprot/P73935 P73935]
 
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** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2]
 
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** [http://www.uniprot.org/uniprot/Q43199 Q43199]
 
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** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38]
 
−
</div>
 
−
{{#set: common-name=adenine phosphoribosyltransferase}}
 
−
{{#set: ec-number=ec-2.4.2.7}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:04, 17 March 2021

Reaction RXN-16027

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR119784





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