Difference between revisions of "TransportSeed-AMMONIA"

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(Created page with "Category:reaction == Reaction PPENTOMUT-RXN == * common-name: ** α-d-ribose 1,5-phosphomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7] * dire...")
 
(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * common-name: ** cis-aconitate hydratase ** d-threo-isocitrate hydro-lyase (cis-aconitate-forming) * direction: ** reve...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PPENTOMUT-RXN ==
+
== Reaction ACONITATEHYDR-RXN ==
 
* common-name:
 
* common-name:
−
** α-d-ribose 1,5-phosphomutase
+
** cis-aconitate hydratase
−
* ec-number:
+
** d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
−
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBOSE-1P]][c] '''<=>''' 1 [[RIBOSE-5P]][c]
+
* 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_20171]]
−
* Gene: [[E_subulatus_07640]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07639]]
+
== Pathway(s)  ==
−
** Category: [[annotation]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20342]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07641]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07638]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20343]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07642]]
 
−
** Category: [[annotation]]
 
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
** '''10''' reactions found over '''16''' reactions in the full pathway
 +
** '''10''' reactions found over '''16''' reactions in the full pathway
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
** '''12''' reactions found over '''18''' reactions in the full pathway
 +
** '''12''' reactions found over '''18''' reactions in the full pathway
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s)  ==
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* DB : RHEA
 
* DB : RHEA
−
* ID : 18793
+
* ID : 22144
−
{{#set: common-name=&alpha;-d-ribose 1,5-phosphomutase}}
+
{{#set: common-name=d-threo-isocitrate hydro-lyase (cis-aconitate-forming)|cis-aconitate hydratase}}
−
{{#set: ec-number=ec-5.4.2.7}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=15}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:06, 13 January 2021

Reaction ACONITATEHYDR-RXN

  • common-name:
    • cis-aconitate hydratase
    • d-threo-isocitrate hydro-lyase (cis-aconitate-forming)
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

    • 5 reactions found over 12 reactions in the full pathway
    • 5 reactions found over 12 reactions in the full pathway
    • 9 reactions found over 12 reactions in the full pathway
    • 9 reactions found over 12 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 5 reactions found over 9 reactions in the full pathway
    • 5 reactions found over 9 reactions in the full pathway
    • 10 reactions found over 12 reactions in the full pathway
    • 10 reactions found over 12 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 10 reactions found over 11 reactions in the full pathway
    • 8 reactions found over 10 reactions in the full pathway
    • 8 reactions found over 10 reactions in the full pathway
    • 6 reactions found over 9 reactions in the full pathway
    • 6 reactions found over 9 reactions in the full pathway
    • 7 reactions found over 9 reactions in the full pathway
    • 7 reactions found over 9 reactions in the full pathway
    • 8 reactions found over 8 reactions in the full pathway
    • 8 reactions found over 8 reactions in the full pathway
    • 10 reactions found over 16 reactions in the full pathway
    • 10 reactions found over 16 reactions in the full pathway
    • 8 reactions found over 9 reactions in the full pathway
    • 8 reactions found over 9 reactions in the full pathway
    • 12 reactions found over 18 reactions in the full pathway
    • 12 reactions found over 18 reactions in the full pathway
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • DB : RHEA
  • ID : 22144





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