Difference between revisions of "3.5.1.52-RXN"

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(Created page with "Category:reaction == Reaction PROTEIN-ARGININE-DEIMINASE-RXN == * common-name: ** protein-arginine deiminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3...")
(Created page with "Category:reaction == Reaction RXN-8730 == * direction: ** left-to-right * ec_number: ** ec-3.1.3.56 == Reaction formula == * 1 CPD-506[c] '''+''' 1 WATER[c] '''=>'...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROTEIN-ARGININE-DEIMINASE-RXN ==
+
== Reaction RXN-8730 ==
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* common-name:
 
−
** protein-arginine deiminase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3.15]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-3.1.3.56
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[Protein-L-Arginines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTEIN-L-CITRULLINE]][c]
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* 1 [[CPD-506]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-3-4-TRIPHOSPHATE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_03928]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_03927]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-4921]], protein citrullination:
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* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
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** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6364]], D-myo-inositol (1,3,4)-trisphosphate biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR107622
+
* METANETX-RXN : MNXR108164
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18090 18090]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11393 11393]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621]
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** [http://www.genome.jp/dbget-bin/www_bget?R03430 R03430]
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q08642 Q08642]
 
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** [http://www.uniprot.org/uniprot/P20717 P20717]
 
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** [http://www.uniprot.org/uniprot/P70708 P70708]
 
−
{{#set: common-name=protein-arginine deiminase}}
 
−
{{#set: ec-number=ec-3.5.3.15}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec_number=ec-3.1.3.56}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction category=annotation}}
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{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Revision as of 19:05, 17 March 2021

Reaction RXN-8730

  • direction:
    • left-to-right
  • ec_number:
    • ec-3.1.3.56

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6364, D-myo-inositol (1,3,4)-trisphosphate biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR108164
  • RHEA:
  • LIGAND-RXN:





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