Difference between revisions of "3.2.1.8-RXN"

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(Created page with "Category:reaction == Reaction RXN-1225 == * common-name: ** digalactosyldiacylglycerol synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.241 ec-2.4.1.241] * dire...")
(Created page with "Category:reaction == Reaction RXN-10696 == * common-name: ** acyl-coa oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6] * direction: ** left-to-righ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1225 ==
+
== Reaction RXN-10696 ==
 
* common-name:
 
* common-name:
−
** digalactosyldiacylglycerol synthase
+
** acyl-coa oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.241 ec-2.4.1.241]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-14553]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[CPD-11517]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11518]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_07245]]
−
* Gene: [[E_subulatus_18293]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_01840]]
+
* Gene: [[E_subulatus_07246]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_09152]]
+
* Gene: [[E_subulatus_07244]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14739]]
+
* Gene: [[E_subulatus_11079]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_14738]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_01839]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_10302]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_09153]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17738]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18292]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-401]], galactolipid biosynthesis I:
+
* [[PWY-735]], jasmonic acid biosynthesis:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''15''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7666]], galactolipid biosynthesis II:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR117439
+
* METANETX-RXN : MNXR116470
−
* RHEA:
+
{{#set: common-name=acyl-coa oxidase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10521 10521]
+
{{#set: ec-number=ec-1.3.3.6}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469]
 
−
{{#set: common-name=digalactosyldiacylglycerol synthase}}
 
−
{{#set: ec-number=ec-2.4.1.241}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:07, 17 March 2021

Reaction RXN-10696

  • common-name:
    • acyl-coa oxidase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116470





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