Difference between revisions of "FORMATETHFLIG-RXN"

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(Created page with "Category:reaction == Reaction RXN-11481 == * common-name: ** 3-hydroxypimeloyl-[acp] methyl ester dehydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2....")
(Created page with "Category:reaction == Reaction FORMATETHFLIG-RXN == * common-name: ** formate:tetrahydropteroylpolyglutamate ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.3 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11481 ==
+
== Reaction FORMATETHFLIG-RXN ==
 
* common-name:
 
* common-name:
−
** 3-hydroxypimeloyl-[acp] methyl ester dehydratase
+
** formate:tetrahydropteroylpolyglutamate ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/6.3.4.3 ec-6.3.4.3]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[Enoylpimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18602]]
+
* Gene: [[E_subulatus_18694]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_18693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
+
* [[PWY-2161]], folate polyglutamylation:
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I:
 +
** '''12''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II (plants):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115886
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20224 20224]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10121 R10121]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
−
* METANETX-RXN : MNXR102206
+
* UNIPROT:
−
{{#set: common-name=3-hydroxypimeloyl-[acp] methyl ester dehydratase}}
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
{{#set: ec-number=ec-4.2.1.59}}
+
** [http://www.uniprot.org/uniprot/P13419 P13419]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P07245 P07245]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P11586 P11586]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/P21164 P21164]
 +
** [http://www.uniprot.org/uniprot/P28723 P28723]
 +
** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
 +
** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
 +
** [http://www.uniprot.org/uniprot/Q07064 Q07064]
 +
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 +
{{#set: common-name=formate:tetrahydropteroylpolyglutamate ligase}}
 +
{{#set: ec-number=ec-6.3.4.3}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction FORMATETHFLIG-RXN

  • common-name:
    • formate:tetrahydropteroylpolyglutamate ligase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2161, folate polyglutamylation:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 12 reactions found over 10 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 10 reactions found over 11 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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