Difference between revisions of "RXN-5110"

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(Created page with "Category:reaction == Reaction AIRCARBOXY-RXN == * common-name: ** phosphoribosylaminoimidazole carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.21 ec-4.1.1.2...")
(Created page with "Category:reaction == Reaction RXN-5110 == * common-name: ** myrcene synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3.15 ec-4.2.3.15] * direction: ** left-to-rig...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AIRCARBOXY-RXN ==
+
== Reaction RXN-5110 ==
 
* common-name:
 
* common-name:
−
** phosphoribosylaminoimidazole carboxylase
+
** myrcene synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.21 ec-4.1.1.21]
+
** [http://enzyme.expasy.org/EC/4.2.3.15 ec-4.2.3.15]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[GERANYL-PP]][c] '''=>''' 1 [[CPD-4888]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_03469]]
+
* Gene: [[E_subulatus_01091]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_01092]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[E_subulatus_03470]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_24029]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01093]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
+
* [[PWY-7410]], ipsdienol biosynthesis:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3041]], monoterpene biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5423]], oleoresin monoterpene volatiles biosynthesis:
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR107276
−
* METANETX-RXN : MNXR108735
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10794 10794]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16968 16968]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02009 R02009]
−
* UNIPROT:
+
{{#set: common-name=myrcene synthase}}
−
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
+
{{#set: ec-number=ec-4.2.3.15}}
−
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/O66608 O66608]
+
{{#set: nb gene associated=4}}
−
** [http://www.uniprot.org/uniprot/O67239 O67239]
+
{{#set: nb pathway associated=3}}
−
** [http://www.uniprot.org/uniprot/P12045 P12045]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P09029 P09029]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P12044 P12044]
 
−
** [http://www.uniprot.org/uniprot/P21264 P21264]
 
−
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
 
−
** [http://www.uniprot.org/uniprot/P15567 P15567]
 
−
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
 
−
** [http://www.uniprot.org/uniprot/P43849 P43849]
 
−
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
 
−
** [http://www.uniprot.org/uniprot/P43850 P43850]
 
−
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
 
−
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
 
−
** [http://www.uniprot.org/uniprot/P22234 P22234]
 
−
** [http://www.uniprot.org/uniprot/P22348 P22348]
 
−
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
 
−
** [http://www.uniprot.org/uniprot/P55195 P55195]
 
−
** [http://www.uniprot.org/uniprot/P50504 P50504]
 
−
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
 
−
** [http://www.uniprot.org/uniprot/P74724 P74724]
 
−
** [http://www.uniprot.org/uniprot/O80937 O80937]
 
−
</div>
 
−
{{#set: common-name=phosphoribosylaminoimidazole carboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.21}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-5110

  • common-name:
    • myrcene synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7410, ipsdienol biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-3041, monoterpene biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5423, oleoresin monoterpene volatiles biosynthesis:
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107276
  • RHEA:
  • LIGAND-RXN:





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