Difference between revisions of "TYROSINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction RNA-POLYMERASE-SUBUNIT-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.11.23 ec-2.7.11.23] * direction: ** reversible == React...")
(Created page with "Category:reaction == Reaction TYROSINE--TRNA-LIGASE-RXN == * common-name: ** tyrosine-trna ligase ** tyrosine—trna ligase * ec-number: ** [http://enzyme.expasy.org/E...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RNA-POLYMERASE-SUBUNIT-KINASE-RXN ==
+
== Reaction TYROSINE--TRNA-LIGASE-RXN ==
 +
* common-name:
 +
** tyrosine-trna ligase
 +
** tyrosine—trna ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.11.23 ec-2.7.11.23]
+
** [http://enzyme.expasy.org/EC/6.1.1.1 ec-6.1.1.1]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DNA-directed-RNA-polymerases]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Phospho-DNA-directed-RNA-polymerases]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_25155]]
−
* Gene: [[E_subulatus_15840]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07117]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_16953]]
+
* Gene: [[E_subulatus_14894]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_04340]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16954]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_04553]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20551]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_04754]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_03315]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20552]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_10643]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging:
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR116262
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR124080
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10221 10221]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04358 R04358]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q03957 Q03957]
+
** [http://www.uniprot.org/uniprot/P28669 P28669]
−
{{#set: ec-number=ec-2.7.11.23}}
+
** [http://www.uniprot.org/uniprot/P22326 P22326]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P36421 P36421]
−
{{#set: nb gene associated=12}}
+
** [http://www.uniprot.org/uniprot/P41256 P41256]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/O51343 O51343]
 +
** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
 +
** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
 +
** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
 +
** [http://www.uniprot.org/uniprot/P47693 P47693]
 +
** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
 +
** [http://www.uniprot.org/uniprot/P43836 P43836]
 +
** [http://www.uniprot.org/uniprot/O83806 O83806]
 +
** [http://www.uniprot.org/uniprot/Q57834 Q57834]
 +
** [http://www.uniprot.org/uniprot/P56417 P56417]
 +
** [http://www.uniprot.org/uniprot/O67632 O67632]
 +
** [http://www.uniprot.org/uniprot/O58739 O58739]
 +
** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
 +
** [http://www.uniprot.org/uniprot/O27795 O27795]
 +
** [http://www.uniprot.org/uniprot/O84065 O84065]
 +
** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
 +
** [http://www.uniprot.org/uniprot/P48527 P48527]
 +
** [http://www.uniprot.org/uniprot/Q49900 Q49900]
 +
** [http://www.uniprot.org/uniprot/P75122 P75122]
 +
** [http://www.uniprot.org/uniprot/P73141 P73141]
 +
** [http://www.uniprot.org/uniprot/P73144 P73144]
 +
** [http://www.uniprot.org/uniprot/P95982 P95982]
 +
** [http://www.uniprot.org/uniprot/P00952 P00952]
 +
** [http://www.uniprot.org/uniprot/P04077 P04077]
 +
** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
 +
** [http://www.uniprot.org/uniprot/P12063 P12063]
 +
** [http://www.uniprot.org/uniprot/P93363 P93363]
 +
** [http://www.uniprot.org/uniprot/O14055 O14055]
 +
</div>
 +
{{#set: common-name=tyrosine&mdash;trna ligase|tyrosine-trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.1}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction TYROSINE--TRNA-LIGASE-RXN

  • common-name:
    • tyrosine-trna ligase
    • tyrosine—trna ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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