Difference between revisions of "RXN-9958"

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(Created page with "Category:reaction == Reaction FGAMSYN-RXN == * common-name: ** phosphoribosylformylglycinamide synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3]...")
(Created page with "Category:reaction == Reaction RXN-9958 == * common-name: ** malonate-semialdehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.18 ec-1.2.1.18] * direct...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FGAMSYN-RXN ==
+
== Reaction RXN-9958 ==
 
* common-name:
 
* common-name:
−
** phosphoribosylformylglycinamide synthetase
+
** malonate-semialdehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.18 ec-1.2.1.18]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[MALONATE-S-ALD]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_11386]]
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* Gene: [[E_subulatus_25404]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11384]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[E_subulatus_11385]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
+
* [[PWY-6373]], acrylate degradation I:
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** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
 
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR123086
−
* METANETX-RXN : MNXR139278
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22989 22989]
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* LIGAND-RXN:
+
{{#set: common-name=malonate-semialdehyde dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
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{{#set: ec-number=ec-1.2.1.18}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O67691 O67691]
 
−
** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
 
−
** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
 
−
** [http://www.uniprot.org/uniprot/O28339 O28339]
 
−
** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
 
−
** [http://www.uniprot.org/uniprot/O26270 O26270]
 
−
** [http://www.uniprot.org/uniprot/Q59042 Q59042]
 
−
** [http://www.uniprot.org/uniprot/Q58660 Q58660]
 
−
** [http://www.uniprot.org/uniprot/O27427 O27427]
 
−
** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
 
−
** [http://www.uniprot.org/uniprot/P35852 P35852]
 
−
** [http://www.uniprot.org/uniprot/P38972 P38972]
 
−
** [http://www.uniprot.org/uniprot/Q55843 Q55843]
 
−
** [http://www.uniprot.org/uniprot/Q55037 Q55037]
 
−
** [http://www.uniprot.org/uniprot/P12041 P12041]
 
−
** [http://www.uniprot.org/uniprot/P12042 P12042]
 
−
** [http://www.uniprot.org/uniprot/P15254 P15254]
 
−
** [http://www.uniprot.org/uniprot/O14228 O14228]
 
−
** [http://www.uniprot.org/uniprot/P35421 P35421]
 
−
** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
 
−
** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
 
−
</div>
 
−
{{#set: common-name=phosphoribosylformylglycinamide synthetase}}
 
−
{{#set: ec-number=ec-6.3.5.3}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-9958

  • common-name:
    • malonate-semialdehyde dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6373, acrylate degradation I:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123086
  • RHEA:





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