Difference between revisions of "RXN-13451"

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(Created page with "Category:reaction == Reaction DIACYLGLYKIN-RXN == * common-name: ** diacylglycerol kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.107 ec-2.7.1.107] * direction:...")
(Created page with "Category:reaction == Reaction RXN-13451 == * common-name: ** very-long-chain acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.9 ec-1.3.8.9] * dire...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIACYLGLYKIN-RXN ==
+
== Reaction RXN-13451 ==
 
* common-name:
 
* common-name:
−
** diacylglycerol kinase
+
** very-long-chain acyl-coa dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.107 ec-2.7.1.107]
+
** [http://enzyme.expasy.org/EC/1.3.8.9 ec-1.3.8.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Very-long-Chain-234-Saturated-acyl-CoAs]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[Very-Long-Chain-Trans-23-Dehydroacyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_23466]]
−
* Gene: [[E_subulatus_10950]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10949]]
+
* Gene: [[E_subulatus_25108]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10948]]
+
* Gene: [[E_subulatus_17420]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_21941]]
+
* Gene: [[E_subulatus_25110]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_24151]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_24150]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_24152]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_10947]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10951]]
+
* Gene: [[E_subulatus_21544]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06061]]
+
* Gene: [[E_subulatus_25109]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
 
−
** '''6''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR118091
−
* METANETX-RXN : MNXR115829
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19182 19182]
−
* LIGAND-RXN:
+
{{#set: common-name=very-long-chain acyl-coa dehydrogenase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
+
{{#set: ec-number=ec-1.3.8.9}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
 
−
** [http://www.uniprot.org/uniprot/P49621 P49621]
 
−
** [http://www.uniprot.org/uniprot/P49619 P49619]
 
−
** [http://www.uniprot.org/uniprot/P51556 P51556]
 
−
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
 
−
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
 
−
** [http://www.uniprot.org/uniprot/O08560 O08560]
 
−
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
 
−
** [http://www.uniprot.org/uniprot/P20192 P20192]
 
−
** [http://www.uniprot.org/uniprot/P23743 P23743]
 
−
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
 
−
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
 
−
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
 
−
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
 
−
</div>
 
−
{{#set: common-name=diacylglycerol kinase}}
 
−
{{#set: ec-number=ec-2.7.1.107}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-13451

  • common-name:
    • very-long-chain acyl-coa dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR118091
  • RHEA:





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