Difference between revisions of "RXN-22206"

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(Created page with "Category:reaction == Reaction DIAMINOPIMDECARB-RXN == * common-name: ** diaminopimelate decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.20 ec-4.1.1.20] *...")
(Created page with "Category:reaction == Reaction RXN-22206 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24184[c] '''=>''' 1.0 CPD-24185[c] == Gene(s) associated...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction DIAMINOPIMDECARB-RXN ==
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== Reaction RXN-22206 ==
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* common-name:
 
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** diaminopimelate decarboxylase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.1.1.20 ec-4.1.1.20]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
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* 1.0 [[CPD-24184]][c] '''=>''' 1.0 [[CPD-24185]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_04924]]
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* Gene: [[EsuFWS91_14]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[reactions_creator_esub]], Tool: [[unknown-tool]], Assignment: n.a, Comment: gallo2020
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[E_subulatus_04927]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_04925]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_04926]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-2941]], L-lysine biosynthesis II:
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* [[PWY-8238]]:
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** '''6''' reactions found over '''9''' reactions in the full pathway
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** '''2''' reactions found over '''n.a''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III:
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
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** '''6''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5097]], L-lysine biosynthesis VI:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_creator_esub]]; tool: [[curation]]; comment: gallo2020
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* METANETX-RXN : MNXR97141
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15102 15102]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P19572 P19572]
 
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** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
 
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** [http://www.uniprot.org/uniprot/P44316 P44316]
 
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** [http://www.uniprot.org/uniprot/P56129 P56129]
 
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** [http://www.uniprot.org/uniprot/O67262 O67262]
 
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** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
 
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** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
 
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** [http://www.uniprot.org/uniprot/P00861 P00861]
 
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** [http://www.uniprot.org/uniprot/O27390 O27390]
 
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** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
 
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** [http://www.uniprot.org/uniprot/Q58497 Q58497]
 
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** [http://www.uniprot.org/uniprot/O29458 O29458]
 
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** [http://www.uniprot.org/uniprot/P41023 P41023]
 
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** [http://www.uniprot.org/uniprot/P23630 P23630]
 
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** [http://www.uniprot.org/uniprot/P09890 P09890]
 
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** [http://www.uniprot.org/uniprot/Q55484 Q55484]
 
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** [http://www.uniprot.org/uniprot/O05321 O05321]
 
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</div>
 
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{{#set: common-name=diaminopimelate decarboxylase}}
 
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{{#set: ec-number=ec-4.1.1.20}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=4}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=4}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=gallo2020}}
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{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
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{{#set: reconstruction source=reactions_creator_esub}}

Latest revision as of 19:39, 17 March 2021

Reaction RXN-22206

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8238:
    • 2 reactions found over n.a reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-22206&oldid=51540"