Difference between revisions of "RXN-10814"

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(Created page with "Category:reaction == Reaction RXN0-748 == * common-name: ** 2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase ** ribonucleoside-dipho...")
(Created page with "Category:reaction == Reaction RXN-10814 == * common-name: ** phenylalanine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1] ** [http://enzyme....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-748 ==
+
== Reaction RXN-10814 ==
 
* common-name:
 
* common-name:
−
** 2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase
+
** phenylalanine transaminase
−
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 ec-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
 +
** [http://enzyme.expasy.org/EC/2.6.1.57 ec-2.6.1.57]
 +
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP]][c] '''+''' 1 [[Reduced-NrdH-Proteins]][c] '''=>''' 1 [[DGDP]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PHE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_02206]]
−
* Gene: [[E_subulatus_16362]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20463]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_18208]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_25205]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_11791]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_07744]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_25204]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_07745]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16363]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_17309]]
+
* Gene: [[E_subulatus_16058]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_17312]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20464]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17311]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_20465]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_15746]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_15977]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16359]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16361]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_17310]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_15745]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16358]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16360]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II:
+
* [[PWY-5079]], L-phenylalanine degradation III:
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-8014]], L-phenylalanine degradation VI (reductive Stickland reaction):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain):
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PHESYN]], L-phenylalanine biosynthesis I:
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR123416
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor|2'-deoxyguanosine 5'-diphosphate:oxidized nrdh glutaredoxin-like protein oxidoreductase}}
+
* UNIPROT:
−
{{#set: ec-number=ec-1.17.4.1}}
+
** [http://www.uniprot.org/uniprot/P04693 P04693]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P74861 P74861]
−
{{#set: nb gene associated=22}}
+
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
 +
** [http://www.uniprot.org/uniprot/P95468 P95468]
 +
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
 +
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
 +
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
 +
** [http://www.uniprot.org/uniprot/O58489 O58489]
 +
** [http://www.uniprot.org/uniprot/O59096 O59096]
 +
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
 +
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
 +
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
 +
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
 +
** [http://www.uniprot.org/uniprot/O84642 O84642]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25155 25155]
 +
</div>
 +
{{#set: common-name=phenylalanine transaminase}}
 +
{{#set: ec-number=ec-2.6.1.27|ec-2.6.1.57|ec-2.6.1.1}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-10814

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5079, L-phenylalanine degradation III:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-8014, L-phenylalanine degradation VI (reductive Stickland reaction):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain):
    • 3 reactions found over 9 reactions in the full pathway
  • ANAPHENOXI-PWY, L-phenylalanine degradation II (anaerobic):
    • 3 reactions found over 3 reactions in the full pathway
  • PHESYN, L-phenylalanine biosynthesis I:
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=RXN-10814&oldid=51737"