Difference between revisions of "RXN-1321"

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(Created page with "Category:reaction == Reaction 2.7.7.13-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.7.13 == Reaction formula == * 1 GTP[c] '''+''' 1 MANNOSE-1P[c] '...")
(Created page with "Category:reaction == Reaction RXN-1321 == * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.12 ec-1.13.11.12] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.7.7.13-RXN ==
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== Reaction RXN-1321 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.13.11.12 ec-1.13.11.12]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-2.7.7.13
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GTP]][c] '''+''' 1 [[MANNOSE-1P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GDP-MANNOSE]][c] '''+''' 1 [[PPI]][c]
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* 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-725]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_08993]]
 +
** Category: [[orthology]]
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_05195]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_07286]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_13783]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_13785]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-882]], L-ascorbate biosynthesis I (plants, L-galactose pathway):
+
* [[PWY-735]], jasmonic acid biosynthesis:
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** '''6''' reactions found over '''5''' reactions in the full pathway
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** '''15''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-5659]], GDP-mannose biosynthesis:
+
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis:
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** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* METANETX-RXN : MNXR101375
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* METANETX-RXN : MNXR111452
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15229 15229]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34496 34496]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00885 R00885]
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** [http://www.genome.jp/dbget-bin/www_bget?R07869 R07869]
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* UNIPROT:
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{{#set: ec-number=ec-1.13.11.12}}
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** [http://www.uniprot.org/uniprot/Q9TRF4 Q9TRF4]
 
−
** [http://www.uniprot.org/uniprot/Q59427 Q59427]
 
−
** [http://www.uniprot.org/uniprot/P41940 P41940]
 
−
** [http://www.uniprot.org/uniprot/O22287 O22287]
 
−
** [http://www.uniprot.org/uniprot/O74484 O74484]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-2.7.7.13}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=0}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN-1321

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 15 reactions found over 19 reactions in the full pathway
  • PWY-5410, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis:
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111452
  • RHEA:
  • LIGAND-RXN:





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