Difference between revisions of "RXN66-474"

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(Created page with "Category:reaction == Reaction RXN0-302 == * common-name: ** 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.12 ec-...")
(Created page with "Category:reaction == Reaction RXN66-474 == * common_name: ** straight chain (r)-2-hydroxy fatty acyl-coa ligase * direction: ** left-to-right * ec_number: ** ec-6.2.1 == R...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-302 ==
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== Reaction RXN66-474 ==
* common-name:
+
* common_name:
** 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
+
** straight chain (r)-2-hydroxy fatty acyl-coa ligase
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.6.1.12 ec-4.6.1.12]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-6.2.1
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[CMP]][c]
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[R2OH-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[R2-2OH-Straight-Chain-234-Sat-FA-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_04681]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
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* [[PWY66-388]], ceramide degradation by α-oxidation:
** '''7''' reactions found over '''9''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7560]], methylerythritol phosphate pathway II:
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR101424
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* METANETX-RXN : MNXR123744
* RHEA:
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{{#set: common_name=straight chain (r)-2-hydroxy fatty acyl-coa ligase}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23865 23865]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
 
{{#set: common-name=2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase}}
 
{{#set: ec-number=ec-4.6.1.12}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
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{{#set: ec_number=ec-6.2.1}}
{{#set: nb pathway associated=2}}
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{{#set: nb gene associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: nb pathway associated=1}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:40, 17 March 2021

Reaction RXN66-474

  • common_name:
    • straight chain (r)-2-hydroxy fatty acyl-coa ligase
  • direction:
    • left-to-right
  • ec_number:
    • ec-6.2.1

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-388, ceramide degradation by α-oxidation:
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR123744