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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction GDPKIN-RXN == | + | == Reaction RXN-11195 == |
| | * common-name: | | * common-name: |
| − | ** gdp kinase | + | ** methemoglobin reductase |
| − | ** nucleoside diphosphate kinase
| |
| | * ec-number: | | * ec-number: |
| − | ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6] | + | ** [http://enzyme.expasy.org/EC/1.6.2.2 ec-1.6.2.2] |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[ATP]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GTP]][c] | + | * 2 [[Ferrihemoglobins]][c] '''+''' 1 [[NADH]][c] '''=>''' 2 [[Ferrohemoglobins]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * Gene: [[E_subulatus_03679]] |
| − | * Gene: [[E_subulatus_11037]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19893]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03752]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11363]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17017]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03631]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13580]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11038]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11362]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24493]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19894]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17018]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03750]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11039]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17016]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03562]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03563]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15295]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13578]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23205]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17015]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19892]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_25805]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13577]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11361]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13579]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03751]] | |
| | ** Category: [[annotation]] | | ** Category: [[annotation]] |
| | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PPGPPMET-PWY]], ppGpp metabolism:
| |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
| |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
| |
| | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
| | == External links == | | == External links == |
| − | * METANETX-RXN : MNXR96119 | + | * METANETX-RXN : MNXR116774 |
| − | * RHEA:
| + | {{#set: common-name=methemoglobin reductase}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27687 27687]
| + | {{#set: ec-number=ec-1.6.2.2}} |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00330 R00330]
| |
| − | {{#set: common-name=nucleoside diphosphate kinase|gdp kinase}} | |
| − | {{#set: ec-number=ec-2.7.4.6}} | |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: nb gene associated=27}} | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated=2}} | + | {{#set: nb pathway associated=0}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools}} |
| | {{#set: reconstruction comment=n.a}} | | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} | + | {{#set: reconstruction source=ectocarpus_subulatus}} |
