Difference between revisions of "RXN0-1134"

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(Created page with "Category:reaction == Reaction METHYLENETHFDEHYDROG-NADP-RXN == * common-name: ** methylenetetrahydrofolate dehydrogenase (nadp+) ** methylenetetrahydrofolate dehydrogenase...")
(Created page with "Category:reaction == Reaction RXN0-1134 == * common-name: ** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase ** pyruvate dehydrogena...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLENETHFDEHYDROG-NADP-RXN ==
+
== Reaction RXN0-1134 ==
 
* common-name:
 
* common-name:
−
** methylenetetrahydrofolate dehydrogenase (nadp+)
+
** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
−
** methylenetetrahydrofolate dehydrogenase
+
** pyruvate dehydrogenase (acetyl-transferring)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.5 ec-1.5.1.5]
+
** [http://enzyme.expasy.org/EC/1.2.4.1 ec-1.2.4.1]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADPH]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_02152]]
−
* Gene: [[E_subulatus_01722]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_01721]]
+
* Gene: [[E_subulatus_14278]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_20899]]
+
* Gene: [[E_subulatus_02151]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_08637]]
+
* Gene: [[E_subulatus_02149]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_08636]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18694]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_00189]]
+
* Gene: [[E_subulatus_02150]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18693]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_08635]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20898]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[1CMET2-PWY]], folate transformations III (E. coli):
+
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA I:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''12''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II (plants):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
 
−
** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 62: Line 33:
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR116057
+
* METANETX-RXN : MNXR123105
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22815 22815]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01220 R01220]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P09440 P09440]
+
** [http://www.uniprot.org/uniprot/P06959 P06959]
−
** [http://www.uniprot.org/uniprot/P07245 P07245]
+
** [http://www.uniprot.org/uniprot/P26267 P26267]
−
** [http://www.uniprot.org/uniprot/P11586 P11586]
+
** [http://www.uniprot.org/uniprot/P35485 P35485]
−
** [http://www.uniprot.org/uniprot/P44313 P44313]
+
** [http://www.uniprot.org/uniprot/Q59097 Q59097]
−
** [http://www.uniprot.org/uniprot/P47259 P47259]
+
** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
−
** [http://www.uniprot.org/uniprot/P54382 P54382]
+
** [http://www.uniprot.org/uniprot/P45119 P45119]
−
** [http://www.uniprot.org/uniprot/O67736 O67736]
+
** [http://www.uniprot.org/uniprot/P11966 P11966]
−
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
+
** [http://www.uniprot.org/uniprot/P35488 P35488]
−
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
+
** [http://www.uniprot.org/uniprot/P47515 P47515]
−
** [http://www.uniprot.org/uniprot/P24186 P24186]
+
** [http://www.uniprot.org/uniprot/P21882 P21882]
−
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
+
** [http://www.uniprot.org/uniprot/P47516 P47516]
−
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
+
** [http://www.uniprot.org/uniprot/P21881 P21881]
−
** [http://www.uniprot.org/uniprot/P51696 P51696]
+
** [http://www.uniprot.org/uniprot/P21873 P21873]
−
** [http://www.uniprot.org/uniprot/O65269 O65269]
+
** [http://www.uniprot.org/uniprot/P16387 P16387]
−
** [http://www.uniprot.org/uniprot/O65271 O65271]
+
** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
−
** [http://www.uniprot.org/uniprot/O68031 O68031]
+
** [http://www.uniprot.org/uniprot/P08559 P08559]
−
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
+
** [http://www.uniprot.org/uniprot/P11177 P11177]
−
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
+
** [http://www.uniprot.org/uniprot/P29803 P29803]
 +
** [http://www.uniprot.org/uniprot/P29804 P29804]
 +
** [http://www.uniprot.org/uniprot/P26284 P26284]
 +
** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
 +
** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
 +
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 +
** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
 +
** [http://www.uniprot.org/uniprot/Q09171 Q09171]
 +
** [http://www.uniprot.org/uniprot/P52901 P52901]
 +
** [http://www.uniprot.org/uniprot/P79931 P79931]
 +
** [http://www.uniprot.org/uniprot/P79932 P79932]
 +
** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
 +
** [http://www.uniprot.org/uniprot/P10801 P10801]
 +
** [http://www.uniprot.org/uniprot/P21874 P21874]
 +
** [http://www.uniprot.org/uniprot/P49432 P49432]
 +
** [http://www.uniprot.org/uniprot/Q59820 Q59820]
 +
** [http://www.uniprot.org/uniprot/P35486 P35486]
 +
** [http://www.uniprot.org/uniprot/P35487 P35487]
 +
** [http://www.uniprot.org/uniprot/Q06437 Q06437]
 +
** [http://www.uniprot.org/uniprot/P32473 P32473]
 +
** [http://www.uniprot.org/uniprot/Q59107 Q59107]
 +
** [http://www.uniprot.org/uniprot/P73405 P73405]
 +
** [http://www.uniprot.org/uniprot/Q49109 Q49109]
 +
** [http://www.uniprot.org/uniprot/O48685 O48685]
 +
** [http://www.uniprot.org/uniprot/P52902 P52902]
 +
** [http://www.uniprot.org/uniprot/P52904 P52904]
 +
** [http://www.uniprot.org/uniprot/P52903 P52903]
 +
** [http://www.uniprot.org/uniprot/O66112 O66112]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
 +
** [http://www.uniprot.org/uniprot/O69478 O69478]
 +
** [http://www.uniprot.org/uniprot/P10802 P10802]
 
</div>
 
</div>
−
{{#set: common-name=methylenetetrahydrofolate dehydrogenase|methylenetetrahydrofolate dehydrogenase (nadp+)}}
+
{{#set: common-name=pyruvate dehydrogenase (acetyl-transferring)|pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase}}
−
{{#set: ec-number=ec-1.5.1.5}}
+
{{#set: ec-number=ec-1.2.4.1}}
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN0-1134

  • common-name:
    • pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
    • pyruvate dehydrogenase (acetyl-transferring)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PYRUVDEHYD-PWY, pyruvate decarboxylation to acetyl CoA I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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