Difference between revisions of "RXN-12581"

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(Created page with "Category:reaction == Reaction FORMYLTHFDEFORMYL-RXN == * direction: ** left-to-right * ec_number: ** ec-3.5.1.10 == Reaction formula == * 1 FORMYL-THF-GLU-N[c] '''+'''...")
(Created page with "Category:reaction == Reaction RXN-12581 == * common-name: ** all-trans-retinol dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.105 ec-1.1.1.105] * directi...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction FORMYLTHFDEFORMYL-RXN ==
+
== Reaction RXN-12581 ==
 +
* common-name:
 +
** all-trans-retinol dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.105 ec-1.1.1.105]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* ec_number:
 
** ec-3.5.1.10
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[CRPB-all-trans-Retinol]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_21402]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-2201]], folate transformations I:
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* [[PWY-6872]], retinoate biosynthesis I:
** '''12''' reactions found over '''10''' reactions in the full pathway
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** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
** '''10''' reactions found over '''24''' reactions in the full pathway
 
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 
** '''6''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR115889
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* METANETX-RXN : MNXR117642
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48489 48489]
* LIGAND-RXN:
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{{#set: common-name=all-trans-retinol dehydrogenase}}
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
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{{#set: ec-number=ec-1.1.1.105}}
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P37051 P37051]
 
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
 
** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
 
** [http://www.uniprot.org/uniprot/Q46339 Q46339]
 
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec_number=ec-3.5.1.10}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction RXN-12581

  • common-name:
    • all-trans-retinol dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6872, retinoate biosynthesis I:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117642
  • RHEA: