Difference between revisions of "CYTIDEAM2-RXN"

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(Created page with "Category:reaction == Reaction RXN-10722 == * direction: ** left-to-right == Reaction formula == * 1 CPD-11552[c] '''=>''' 1 PROTON[c] '''+''' 1 WATER[c] '''+''...")
(Created page with "Category:reaction == Reaction CYTIDEAM2-RXN == * common-name: ** cytidine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.5 ec-3.5.4.5] * direction: ** left-t...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10722 ==
+
== Reaction CYTIDEAM2-RXN ==
 +
* common-name:
 +
** cytidine deaminase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.5.4.5 ec-3.5.4.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-11552]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHURENATE]][c]
+
* 1 [[CYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[URIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_01214]]
 +
** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01215]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine):
+
* [[PWY-7193]], pyrimidine ribonucleosides salvage I:
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1295]], pyrimidine ribonucleosides degradation:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6556]], pyrimidine ribonucleosides salvage II:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR108552
+
* METANETX-RXN : MNXR97039
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03954 R03954]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P47718 P47718]
 +
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
 +
** [http://www.uniprot.org/uniprot/P47298 P47298]
 +
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
 +
** [http://www.uniprot.org/uniprot/P32320 P32320]
 +
** [http://www.uniprot.org/uniprot/P75051 P75051]
 +
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
 +
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
 +
** [http://www.uniprot.org/uniprot/O65571 O65571]
 +
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
 +
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
 +
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
 +
** [http://www.uniprot.org/uniprot/O65896 O65896]
 +
{{#set: common-name=cytidine deaminase}}
 +
{{#set: ec-number=ec-3.5.4.5}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction CYTIDEAM2-RXN

  • common-name:
    • cytidine deaminase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7193, pyrimidine ribonucleosides salvage I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1295, pyrimidine ribonucleosides degradation:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6556, pyrimidine ribonucleosides salvage II:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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