Difference between revisions of "GMP-SYN-NH3-RXN"

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(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] * direction: ** reversible == Reaction formula =...")
(Created page with "Category:reaction == Reaction GMP-SYN-NH3-RXN == * common-name: ** xanthosine-5'-phosphate:ammonia ligase (amp-forming) * direction: ** left-to-right == Reaction formula =...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction O-SUCCHOMOSERLYASE-RXN ==
+
== Reaction GMP-SYN-NH3-RXN ==
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
+
** xanthosine-5'-phosphate:ammonia ligase (amp-forming)
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22240]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_06838]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06836]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_18250]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_09214]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06837]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_09216]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06834]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_06835]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_09215]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-801]], homocysteine and cysteine interconversion:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR104380
+
* METANETX-RXN : MNXR100383
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18302 18302]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
−
* UNIPROT:
+
{{#set: common-name=xanthosine-5'-phosphate:ammonia ligase (amp-forming)}}
−
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
+
{{#set: nb gene associated=9}}
−
** [http://www.uniprot.org/uniprot/P38675 P38675]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P24601 P24601]
+
{{#set: reconstruction category=annotation|orthology}}
−
** [http://www.uniprot.org/uniprot/P00935 P00935]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O04981 O04981]
 
−
** [http://www.uniprot.org/uniprot/O04982 O04982]
 
−
** [http://www.uniprot.org/uniprot/O81334 O81334]
 
−
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 
−
{{#set: ec-number=ec-2.5.1.48}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction GMP-SYN-NH3-RXN

  • common-name:
    • xanthosine-5'-phosphate:ammonia ligase (amp-forming)
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR100383
  • RHEA:
  • LIGAND-RXN:





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