Difference between revisions of "1.1.1.39-RXN"

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(Created page with "Category:reaction == Reaction 1.14.13.8-RXN == * common-name: ** dimethylaniline monooxygenase ** n,n-dimethylaniline monooxygenase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction 1.1.1.39-RXN == * common-name: ** malate dehydrogenase, nad-requiring * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38] * di...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.14.13.8-RXN ==
+
== Reaction 1.1.1.39-RXN ==
 
* common-name:
 
* common-name:
−
** dimethylaniline monooxygenase
+
** malate dehydrogenase, nad-requiring
−
** n,n-dimethylaniline monooxygenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.13.8 ec-1.14.13.8]
+
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[NN-DIMETHYLANILINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[NN-DIMETHYLANILINE-N-OXIDE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_23246]]
−
* Gene: [[E_subulatus_08188]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_13712]]
+
* Gene: [[E_subulatus_23247]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_12999]]
+
* Gene: [[E_subulatus_23250]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_13182]]
+
* Gene: [[E_subulatus_23248]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_13440]]
+
* Gene: [[E_subulatus_23249]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13183]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_21060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13715]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18754]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_18753]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13711]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13713]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_08772]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_08189]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13714]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_08190]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_13181]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_17574]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7686]], L-malate degradation II:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-3641]], L-carnitine degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7118]], chitin deacetylation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I:
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR108107
+
* METANETX-RXN : MNXR101446
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24469 24469]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12654 12654]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q48662 Q48662]
 +
** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
 +
** [http://www.uniprot.org/uniprot/O59029 O59029]
 +
** [http://www.uniprot.org/uniprot/P16468 P16468]
 +
** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
 +
** [http://www.uniprot.org/uniprot/P26616 P26616]
 +
** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
 +
** [http://www.uniprot.org/uniprot/P37224 P37224]
 +
** [http://www.uniprot.org/uniprot/P37225 P37225]
 +
** [http://www.uniprot.org/uniprot/P37221 P37221]
 +
** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
 +
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03344 R03344]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
−
* UNIPROT:
+
{{#set: common-name=malate dehydrogenase, nad-requiring}}
−
** [http://www.uniprot.org/uniprot/P16549 P16549]
+
{{#set: ec-number=ec-1.1.1.38}}
−
** [http://www.uniprot.org/uniprot/P17636 P17636]
 
−
** [http://www.uniprot.org/uniprot/Q01740 Q01740]
 
−
** [http://www.uniprot.org/uniprot/Q04799 Q04799]
 
−
** [http://www.uniprot.org/uniprot/Q7M061 Q7M061]
 
−
** [http://www.uniprot.org/uniprot/P17635 P17635]
 
−
** [http://www.uniprot.org/uniprot/P49328 P49328]
 
−
** [http://www.uniprot.org/uniprot/P32417 P32417]
 
−
** [http://www.uniprot.org/uniprot/P31512 P31512]
 
−
** [http://www.uniprot.org/uniprot/Q7M2Q0 Q7M2Q0]
 
−
** [http://www.uniprot.org/uniprot/P31513 P31513]
 
−
** [http://www.uniprot.org/uniprot/P49109 P49109]
 
−
** [http://www.uniprot.org/uniprot/P49326 P49326]
 
−
{{#set: common-name=n,n-dimethylaniline monooxygenase|dimethylaniline monooxygenase}}
 
−
{{#set: ec-number=ec-1.14.13.8}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=18}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction 1.1.1.39-RXN

  • common-name:
    • malate dehydrogenase, nad-requiring
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7686, L-malate degradation II:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-3641, L-carnitine degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 4 reactions found over 4 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I:
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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