Difference between revisions of "1.1.1.39-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction PEPSYNTH-RXN == * direction: ** left-to-right * ec_number: ** ec-2.7.9.2 == Reaction formula == * 1 ATP[c] '''+''' 1 PYRUVATE[c] '''+...")
 
(Created page with "Category:reaction == Reaction 1.1.1.39-RXN == * common-name: ** malate dehydrogenase, nad-requiring * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38] * di...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPSYNTH-RXN ==
+
== Reaction 1.1.1.39-RXN ==
 +
* common-name:
 +
** malate dehydrogenase, nad-requiring
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-2.7.9.2
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_23246]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23247]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23250]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23248]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23249]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7686]], L-malate degradation II:
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-3641]], L-carnitine degradation III:
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7118]], chitin deacetylation:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
** '''13''' reactions found over '''13''' reactions in the full pathway
 
** '''13''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR101446
−
* ID : Q57962
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12654 12654]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q48662 Q48662]
 +
** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
 +
** [http://www.uniprot.org/uniprot/O59029 O59029]
 +
** [http://www.uniprot.org/uniprot/P16468 P16468]
 +
** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
 +
** [http://www.uniprot.org/uniprot/P26616 P26616]
 +
** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
 +
** [http://www.uniprot.org/uniprot/P37224 P37224]
 +
** [http://www.uniprot.org/uniprot/P37225 P37225]
 +
** [http://www.uniprot.org/uniprot/P37221 P37221]
 +
** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
 +
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
 +
{{#set: common-name=malate dehydrogenase, nad-requiring}}
 +
{{#set: ec-number=ec-1.1.1.38}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-2.7.9.2}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:40, 17 March 2021

Reaction 1.1.1.39-RXN

  • common-name:
    • malate dehydrogenase, nad-requiring
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-7686, L-malate degradation II:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-3641, L-carnitine degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 4 reactions found over 4 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I:
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=1.1.1.39-RXN&oldid=51786"