Difference between revisions of "1TRANSKETO-RXN"

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(Created page with "Category:reaction == Reaction OROPRIBTRANS-RXN == * common-name: ** orotate phosphoribosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.10 ec-2.4.2.10] *...")
(Created page with "Category:reaction == Reaction PHOSMANMUT-RXN == * common-name: ** phosphomannomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8] * direction: ** rever...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OROPRIBTRANS-RXN ==
+
== Reaction PHOSMANMUT-RXN ==
 
* common-name:
 
* common-name:
−
** orotate phosphoribosyltransferase
+
** phosphomannomutase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.10 ec-2.4.2.10]
+
** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OROTIDINE-5-PHOSPHATE]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[OROTATE]][c] '''+''' 1 [[PRPP]][c]
+
* 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[E_subulatus_06898]]
−
* Gene: [[E_subulatus_20075]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20073]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[E_subulatus_06900]]
−
* Gene: [[E_subulatus_20070]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20068]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20071]]
+
* Gene: [[E_subulatus_06901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20072]]
+
* Gene: [[E_subulatus_06899]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20074]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20069]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_20067]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7791]]:
+
* [[PWY-5659]], GDP-mannose biosynthesis:
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
+
* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7790]]:
+
* [[PWY-882]], L-ascorbate biosynthesis I (plants, L-galactose pathway):
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7456]], &beta;-(1,4)-mannan degradation:
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR101729
−
* ID : P08309
+
* RHEA:
−
{{#set: common-name=orotate phosphoribosyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11143 11143]
−
{{#set: ec-number=ec-2.4.2.10}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P26276 P26276]
 +
** [http://www.uniprot.org/uniprot/P29955 P29955]
 +
** [http://www.uniprot.org/uniprot/P24175 P24175]
 +
** [http://www.uniprot.org/uniprot/P07283 P07283]
 +
** [http://www.uniprot.org/uniprot/P47723 P47723]
 +
** [http://www.uniprot.org/uniprot/Q57842 Q57842]
 +
** [http://www.uniprot.org/uniprot/P47299 P47299]
 +
** [http://www.uniprot.org/uniprot/Q59428 Q59428]
 +
** [http://www.uniprot.org/uniprot/Q06951 Q06951]
 +
** [http://www.uniprot.org/uniprot/Q49913 Q49913]
 +
** [http://www.uniprot.org/uniprot/P75050 P75050]
 +
** [http://www.uniprot.org/uniprot/Q51847 Q51847]
 +
{{#set: common-name=phosphomannomutase}}
 +
{{#set: ec-number=ec-5.4.2.8}}
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=9}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 15:18, 15 March 2021

Reaction PHOSMANMUT-RXN

  • common-name:
    • phosphomannomutase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5659, GDP-mannose biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (plants, L-galactose pathway):
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-7456, β-(1,4)-mannan degradation:
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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