Difference between revisions of "2-METHYLACYL-COA-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == * common-name: ** [acyl-carrier-protein] s-malonyltransferase ** s-malonyltransferase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52] * direction: ** left-to-right == Rea...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction MALONYL-COA-ACP-TRANSACYL-RXN ==
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== Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN ==
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* common-name:
 
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** [acyl-carrier-protein] s-malonyltransferase
 
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** s-malonyltransferase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
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** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52]
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
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** [http://enzyme.expasy.org/EC/2.3.1.39 ec-2.3.1.39]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c]
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* 1 [[CPD-804]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[E_subulatus_15037]]
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* Gene: [[E_subulatus_15873]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[E_subulatus_24809]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[E_subulatus_15038]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_06111]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[E_subulatus_06112]]
 
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** Category: [[annotation]]
 
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation:
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''8''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-8012]]:
 
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** '''1''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* DB : UNIPROT
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* METANETX-RXN : MNXR115593
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* ID : Q9YBK5
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* RHEA:
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{{#set: common-name=s-malonyltransferase|[acyl-carrier-protein] s-malonyltransferase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25789 25789]
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{{#set: ec-number=ec-2.3.1.86|ec-2.3.1.85|ec-2.3.1.39}}
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
 +
{{#set: ec-number=ec-4.1.2.52}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=5}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=4}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}

Revision as of 15:21, 15 March 2021

Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR115593
  • RHEA:
  • LIGAND-RXN:





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