Difference between revisions of "2.1.1.57-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-CARBON-DIOXIDE == * direction: ** reversible == Reaction formula == * 1.0 CARBON-DIOXIDE[C-BOUNDARY] '''<=>''' 1.0 CARBON-...")
 
(Created page with "Category:reaction == Reaction SERINE--TRNA-LIGASE-RXN == * common-name: ** serine-trna ligase ** l-serine:trnaser ligase (amp-forming) * ec-number: ** [http://enzyme.expas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-CARBON-DIOXIDE ==
+
== Reaction SERINE--TRNA-LIGASE-RXN ==
 +
* common-name:
 +
** serine-trna ligase
 +
** l-serine:trnaser ligase (amp-forming)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CARBON-DIOXIDE]][C-BOUNDARY] '''<=>''' 1.0 [[CARBON-DIOXIDE]][e]
+
* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[SER-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-SER-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_18290]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_17805]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_18289]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* DB : RHEA
−
{{#set: nb gene associated=0}}
+
* ID : 12292
−
{{#set: nb pathway associated=0}}
+
{{#set: common-name=l-serine:trnaser ligase (amp-forming)|serine-trna ligase}}
−
{{#set: reconstruction category=manual}}
+
{{#set: ec-number=ec-6.1.1.11}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 18:01, 13 January 2021

Reaction SERINE--TRNA-LIGASE-RXN

  • common-name:
    • serine-trna ligase
    • l-serine:trnaser ligase (amp-forming)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • DB : RHEA
  • ID : 12292





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