Difference between revisions of "2.4.1.151-RXN"

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(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * common-name: ** nadp-dependent isocitra...")
(Created page with "Category:reaction == Reaction 2.4.1.151-RXN == * common-name: ** galactosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.87 ec-2.4.1.87] * direction: ** l...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8642 ==
+
== Reaction 2.4.1.151-RXN ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* common-name:
 
* common-name:
−
** nadp-dependent isocitrate dehydrogenase
+
** galactosyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.4.1.87 ec-2.4.1.87]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* synonymous:
 
−
** dual-cofactor-specific isocitrate dehydrogenase
 
−
** oxalsuccinic decarboxylase
 
−
** nadp-linked isocitrate dehydrogenase
 
−
** nadp-specific isocitrate dehydrogenase
 
−
** isocitrate dehydrogenase (nadp-dependent)
 
−
** nadp-dependent isocitric dehydrogenase
 
−
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
−
** nadp+-linked isocitrate dehydrogenase
 
−
** nadp+-icdh
 
−
** nadp+-idh
 
−
** idp
 
−
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
−
** idh (ambiguous)
 
−
** idp3
 
−
** nadp isocitric dehydrogenase
 
−
** idp1
 
−
** idp2
 
−
** isocitrate (nadp) dehydrogenase
 
−
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_13345]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_20561]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_01402]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_01400]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_20560]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_05950]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_20562]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22703]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22704]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_23844]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_01401]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03212]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide):
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR105305
+
* METANETX-RXN : MNXR107725
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13014 13014]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02791 R02791]
−
{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
+
* UNIPROT:
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q28855 Q28855]
−
{{#set: synonymous=dual-cofactor-specific isocitrate dehydrogenase|oxalsuccinic decarboxylase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|nadp-specific isocitrate dehydrogenase|idp|isocitrate dehydrogenase (nadp-dependent)|nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp3|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|idp1|nadp+-idh|nadp isocitric dehydrogenase|nadp+-icdh|idp2|idh (ambiguous)|isocitrate (nadp) dehydrogenase|nadp+-linked isocitrate dehydrogenase}}
+
{{#set: common-name=galactosyltransferase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-2.4.1.87}}
−
{{#set: nb pathway associated=0}}
+
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=11}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction 2.4.1.151-RXN

  • common-name:
    • galactosyltransferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7434, terminal O-glycans residues modification (via type 2 precursor disaccharide):
    • 10 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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