Difference between revisions of "2.4.1.46-RXN"

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(Created page with "Category:reaction == Reaction RXN66-168 == * common-name: ** glucuronosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.17 ec-2.4.1.17] * direction: ** lef...")
(Created page with "Category:reaction == Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN == * common-name: ** serine palmitoyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.50 ec-2...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-168 ==
+
== Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN ==
 
* common-name:
 
* common-name:
−
** glucuronosyltransferase
+
** serine palmitoyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.17 ec-2.4.1.17]
+
** [http://enzyme.expasy.org/EC/2.3.1.50 ec-2.3.1.50]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-2742]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CPD-2747]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_17772]]
+
* Gene: [[E_subulatus_23638]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_23388]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_21182]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_23387]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[PWY-5129]], sphingolipid biosynthesis (plants):
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast):
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY3DJ-12]], ceramide de novo biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=glucuronosyltransferase}}
+
* METANETX-RXN : MNXR104347
−
{{#set: ec-number=ec-2.4.1.17}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14762 14762]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P25045 P25045]
 +
** [http://www.uniprot.org/uniprot/O15270 O15270]
 +
** [http://www.uniprot.org/uniprot/P48241 P48241]
 +
** [http://www.uniprot.org/uniprot/Q09925 Q09925]
 +
** [http://www.uniprot.org/uniprot/P40970 P40970]
 +
** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
 +
** [http://www.uniprot.org/uniprot/Q20375 Q20375]
 +
** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
 +
{{#set: common-name=serine palmitoyltransferase}}
 +
{{#set: ec-number=ec-2.3.1.50}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Revision as of 15:21, 15 March 2021

Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN

  • common-name:
    • serine palmitoyltransferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5129, sphingolipid biosynthesis (plants):
    • 2 reactions found over 13 reactions in the full pathway
  • SPHINGOLIPID-SYN-PWY, sphingolipid biosynthesis (yeast):
    • 2 reactions found over 11 reactions in the full pathway
  • PWY3DJ-12, ceramide de novo biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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