Difference between revisions of "2.5.1.32-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction NADH-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.6.99.3 ec-1.6.99.3] * direction: ** reversible == Reaction formula =...") |
(Created page with "Category:reaction == Reaction 2.5.1.32-RXN == * direction: ** left-to-right * synonymous: ** psase ** geranylgeranyl-diphosphate geranylgeranyltransferase == Reaction form...") |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 2.5.1.32-RXN == |
− | |||
− | |||
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * synonymous: | ||
+ | ** psase | ||
+ | ** geranylgeranyl-diphosphate geranylgeranyltransferase | ||
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[E_subulatus_18355]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6287]], neurosporene biosynthesis: | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7943]], lycopadiene biosynthesis: | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: | + | * METANETX-RXN : MNXR102655 |
− | {{#set: | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P53609 P53609] | ||
+ | ** [http://www.uniprot.org/uniprot/P37295 P37295] | ||
+ | ** [http://www.uniprot.org/uniprot/P22872 P22872] | ||
+ | ** [http://www.uniprot.org/uniprot/P53610 P53610] | ||
+ | ** [http://www.uniprot.org/uniprot/P53612 P53612] | ||
+ | ** [http://www.uniprot.org/uniprot/P17056 P17056] | ||
+ | ** [http://www.uniprot.org/uniprot/P49293 P49293] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: synonymous=psase|geranylgeranyl-diphosphate geranylgeranyltransferase}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=3}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=ectocarpus_subulatus}} | {{#set: reconstruction source=ectocarpus_subulatus}} |
Latest revision as of 19:41, 17 March 2021
Contents
Reaction 2.5.1.32-RXN
- direction:
- left-to-right
- synonymous:
- psase
- geranylgeranyl-diphosphate geranylgeranyltransferase
Reaction formula
- 2 GERANYLGERANYL-PP[c] => 1 CPD-464[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_18355
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
- 2 reactions found over 8 reactions in the full pathway
- PWY-6287, neurosporene biosynthesis:
- 2 reactions found over 5 reactions in the full pathway
- PWY-7943, lycopadiene biosynthesis:
- 1 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR102655
- RHEA:
- LIGAND-RXN:
- UNIPROT: