Difference between revisions of "3.1.3.56-RXN"

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(Created page with "Category:reaction == Reaction DIOHBUTANONEPSYN-RXN == * common-name: ** 3,4-dihydroxy-2-butanone-4-phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.1...")
(Created page with "Category:reaction == Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * common-name: ** succinate semialdehyde dehydrogenase, nad+-dependent * ec-number: ** [http://en...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIOHBUTANONEPSYN-RXN ==
+
== Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ==
 
* common-name:
 
* common-name:
−
** 3,4-dihydroxy-2-butanone-4-phosphate synthase
+
** succinate semialdehyde dehydrogenase, nad+-dependent
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.99.12 ec-4.1.99.12]
+
** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_18126]]
+
* Gene: [[E_subulatus_03414]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_18127]]
+
* Gene: [[E_subulatus_18015]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_03415]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[PWY-7978]], N-methylpyrrolidone degradation:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-4321]], L-glutamate degradation IV:
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-6535]], 4-aminobutanoate degradation I:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6473]], 4-aminobutanoate degradation IV:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[GLUDEG-I-PWY]], GABA shunt:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : LIGAND-RXN
+
* METANETX-RXN : MNXR104540
−
* ID : R07281
+
* RHEA:
−
{{#set: common-name=3,4-dihydroxy-2-butanone-4-phosphate synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218]
−
{{#set: ec-number=ec-4.1.99.12}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P51649 P51649]
 +
** [http://www.uniprot.org/uniprot/P51650 P51650]
 +
{{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}}
 +
{{#set: ec-number=ec-1.2.1.24}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:20, 15 March 2021

Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • common-name:
    • succinate semialdehyde dehydrogenase, nad+-dependent
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7978, N-methylpyrrolidone degradation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-4321, L-glutamate degradation IV:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6535, 4-aminobutanoate degradation I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6473, 4-aminobutanoate degradation IV:
    • 1 reactions found over 2 reactions in the full pathway
  • GLUDEG-I-PWY, GABA shunt:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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