Difference between revisions of "3.5.1.26-RXN"

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(Created page with "Category:reaction == Reaction Transport_biomass == * direction: ** left-to-right == Reaction formula == * 1.0 BIOMASS[c] '''=>''' 1.0 BIOMASS[e] == Gene(s) associa...")
(Created page with "Category:reaction == Reaction RXN-7677 == * common-name: ** 71-hydroxychlorophyllide a monooxygenase ** chlorophyllide a oxygenase [overall] * direction: ** left-to-right...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction Transport_biomass ==
+
== Reaction RXN-7677 ==
 +
* common-name:
 +
** 71-hydroxychlorophyllide a monooxygenase
 +
** chlorophyllide a oxygenase [overall]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** cao
 +
** chlorophyllide a oxygenase
 +
** chlorophyll-b synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[BIOMASS]][c] '''=>''' 1.0 [[BIOMASS]][e]
+
* 1 [[CPD-7015]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19759]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_07455]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12890]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_20083]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_06698]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_07456]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_15638]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14078]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03342]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_15639]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16061]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12888]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14079]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16615]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_16614]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03343]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12889]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5068]], chlorophyll cycle:
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[biomass_rxn2]]; tool: [[curation]]; comment: reaction added to avoid biomass accumulation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR111774
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22137 22137]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
 +
{{#set: common-name=chlorophyllide a oxygenase [overall]|71-hydroxychlorophyllide a monooxygenase}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: synonymous=cao|chlorophyllide a oxygenase|chlorophyll-b synthase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=16}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=reaction added to avoid biomass accumulation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=biomass_rxn2}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:19, 15 March 2021

Reaction RXN-7677

  • common-name:
    • 71-hydroxychlorophyllide a monooxygenase
    • chlorophyllide a oxygenase [overall]
  • direction:
    • left-to-right
  • synonymous:
    • cao
    • chlorophyllide a oxygenase
    • chlorophyll-b synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5068, chlorophyll cycle:
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR111774
  • RHEA:
  • LIGAND-RXN:

Property "Common-name" (as page type) with input value "chlorophyllide a oxygenase [overall" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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