Difference between revisions of "3.6.1.19-RXN"

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(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring) * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction RXN-8099 == * common-name: ** methylamine-specific methylcobalamin:coenzyme m methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLVALERATE-RXN ==
+
== Reaction RXN-8099 ==
 
* common-name:
 
* common-name:
−
** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
+
** methylamine-specific methylcobalamin:coenzyme m methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/2.1.1.247 ec-2.1.1.247]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CoM]][c] '''+''' 1 [[Methylated-MtmC-Proteins]][c] '''=>''' 1 [[Me-CoM]][c] '''+''' 1 [[MtmC-Proteins]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_14800]]
+
* Gene: [[E_subulatus_03932]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_02028]]
+
* Gene: [[E_subulatus_03930]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03929]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03931]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5247]], methanogenesis from methylamine:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR122140
−
* METANETX-RXN : MNXR116060
+
* RHEA:
−
* UNIPROT:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18774 18774]
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
{{#set: common-name=methylamine-specific methylcobalamin:coenzyme m methyltransferase}}
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
{{#set: ec-number=ec-2.1.1.247}}
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
{{#set: nb gene associated=4}}
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
 
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
 
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
 
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
 
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
 
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
 
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
 
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
 
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
 
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
−
</div>
 
−
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)}}
 
−
{{#set: ec-number=ec-1.2.4.4}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:08, 17 March 2021

Reaction RXN-8099

  • common-name:
    • methylamine-specific methylcobalamin:coenzyme m methyltransferase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5247, methanogenesis from methylamine:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122140
  • RHEA:





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