Difference between revisions of "3PGAREARR-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-ATP == * direction: ** reversible == Reaction formula == * 1.0 ATP[C-BOUNDARY] '''<=>''' 1.0 ATP[e] == Gene(s) associate...")
(Created page with "Category:reaction == Reaction RXN-5110 == * common-name: ** myrcene synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3.15 ec-4.2.3.15] * direction: ** left-to-rig...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-ATP ==
+
== Reaction RXN-5110 ==
 +
* common-name:
 +
** myrcene synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.2.3.15 ec-4.2.3.15]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ATP]][C-BOUNDARY] '''<=>''' 1.0 [[ATP]][e]
+
* 1 [[GERANYL-PP]][c] '''=>''' 1 [[CPD-4888]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_01091]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01092]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_24029]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_01093]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7410]], ipsdienol biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3041]], monoterpene biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5423]], oleoresin monoterpene volatiles biosynthesis:
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR107276
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16968 16968]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02009 R02009]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: common-name=myrcene synthase}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: ec-number=ec-4.2.3.15}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:05, 17 March 2021

Reaction RXN-5110

  • common-name:
    • myrcene synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7410, ipsdienol biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-3041, monoterpene biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5423, oleoresin monoterpene volatiles biosynthesis:
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107276
  • RHEA:
  • LIGAND-RXN:





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