Difference between revisions of "7KAPSYN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-11263 == * common-name: ** trihydroxyferuloyl spermidine o-methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1 ec-2.1.1]...")
(Created page with "Category:reaction == Reaction DTDPDEHYDRHAMEPIM-RXN == * common-name: ** dtdp-4-dehydrorhamnose 3,5-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11263 ==
+
== Reaction DTDPDEHYDRHAMEPIM-RXN ==
 
* common-name:
 
* common-name:
−
** trihydroxyferuloyl spermidine o-methyltransferase
+
** dtdp-4-dehydrorhamnose 3,5-epimerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1 ec-2.1.1]
+
** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-11667]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-11668]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_03932]]
+
* Gene: [[E_subulatus_02254]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_03931]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_03929]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[E_subulatus_03930]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6442]], spermidine hydroxycinnamic acid conjugates biosynthesis:
+
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis:
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]], dTDP-β-L-rhamnose biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR116815
+
* METANETX-RXN : MNXR104759
−
{{#set: common-name=trihydroxyferuloyl spermidine o-methyltransferase}}
+
* RHEA:
−
{{#set: ec-number=ec-2.1.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1]
 +
** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7]
 +
** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9]
 +
** [http://www.uniprot.org/uniprot/P37745 P37745]
 +
** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5]
 +
** [http://www.uniprot.org/uniprot/P37763 P37763]
 +
** [http://www.uniprot.org/uniprot/Q46770 Q46770]
 +
** [http://www.uniprot.org/uniprot/P29783 P29783]
 +
{{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}}
 +
{{#set: ec-number=ec-5.1.3.13}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 19:05, 17 March 2021

Reaction DTDPDEHYDRHAMEPIM-RXN

  • common-name:
    • dtdp-4-dehydrorhamnose 3,5-epimerase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7814, dTDP-L-daunosamine biosynthesis:
    • 2 reactions found over 6 reactions in the full pathway
  • DTDPRHAMSYN-PWY, dTDP-β-L-rhamnose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=7KAPSYN-RXN&oldid=40357"