Difference between revisions of "ADENODEAMIN-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-Acceptor == * direction: ** reversible == Reaction formula == * 1.0 Acceptor[C-BOUNDARY] '''<=>''' 1.0 Acceptor[e] == Ge...")
 
(Created page with "Category:reaction == Reaction ADENODEAMIN-RXN == * common-name: ** adenosine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.4 ec-3.5.4.4] * direction: ** lef...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-Acceptor ==
+
== Reaction ADENODEAMIN-RXN ==
 +
* common-name:
 +
** adenosine deaminase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.5.4.4 ec-3.5.4.4]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[Acceptor]][C-BOUNDARY] '''<=>''' 1.0 [[Acceptor]][e]
+
* 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[E_subulatus_10338]]
 +
** Category: [[annotation]]
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*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21946]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10339]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21945]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6611]], adenine and adenosine salvage V:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6609]], adenine and adenosine salvage III:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR95432
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
* UNIPROT:
−
{{#set: reconstruction source=import_from_medium}}
+
** [http://www.uniprot.org/uniprot/P22333 P22333]
 +
** [http://www.uniprot.org/uniprot/P00813 P00813]
 +
** [http://www.uniprot.org/uniprot/P03958 P03958]
 +
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
 +
** [http://www.uniprot.org/uniprot/P55266 P55266]
 +
** [http://www.uniprot.org/uniprot/P53984 P53984]
 +
{{#set: common-name=adenosine deaminase}}
 +
{{#set: ec-number=ec-3.5.4.4}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction ADENODEAMIN-RXN

  • common-name:
    • adenosine deaminase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6611, adenine and adenosine salvage V:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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