Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-12585 == * common-name: ** all-trans-retinal dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.36 ec-1.2.1.36] * direction...")
(Created page with "Category:reaction == Reaction AICARSYN-RXN == * common-name: ** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase * ec-number: ** [http://enzyme.expasy.org...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12585 ==
+
== Reaction AICARSYN-RXN ==
 
* common-name:
 
* common-name:
−
** all-trans-retinal dehydrogenase
+
** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.36 ec-1.2.1.36]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Cellular-Retinol-Binding-Proteins]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[RETINOATE]][c]
+
* 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[AICAR]][c] '''+''' 1 [[FUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_16048]]
+
* Gene: [[E_subulatus_00370]]
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16045]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16047]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16044]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16046]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[E_subulatus_16049]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=all-trans-retinal dehydrogenase}}
+
* METANETX-RXN : MNXR108966
−
{{#set: ec-number=ec-1.2.1.36}}
+
* RHEA:
−
{{#set: direction=left-to-right}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23923 23923]
−
{{#set: nb gene associated=6}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21265 P21265]
 +
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 +
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 +
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 +
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 +
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 +
** [http://www.uniprot.org/uniprot/O65180 O65180]
 +
** [http://www.uniprot.org/uniprot/P12047 P12047]
 +
{{#set: common-name=5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase}}
 +
{{#set: ec-number=ec-4.3.2.2}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction AICARSYN-RXN

  • common-name:
    • 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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