Difference between revisions of "ALLANTOINASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-9652 == * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [...")
 
(Created page with "Category:reaction == Reaction ALLANTOINASE-RXN == * direction: ** left-to-right * ec_number: ** ec-3.5.2.5 == Reaction formula == * 1 S-ALLANTOIN[c] '''+''' 1 [[WATER]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9652 ==
+
== Reaction ALLANTOINASE-RXN ==
* common-name:
 
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
 
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* ec_number:
 +
** ec-3.5.2.5
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
+
* 1 [[S-ALLANTOIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALLANTOATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[E_subulatus_22266]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13004]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13005]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_15037]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_08948]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_15038]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_13006]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[E_subulatus_22265]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing):
** '''30''' reactions found over '''31''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5698]], allantoin degradation to ureidoglycolate II (ammonia producing):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
{{#set: common-name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
+
* METANETX-RXN : MNXR107498
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.86|ec-2.3.1.85}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17030 17030]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02425 R02425]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P77671 P77671]
 +
** [http://www.uniprot.org/uniprot/P32375 P32375]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=8}}
+
{{#set: ec_number=ec-3.5.2.5}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction comment=annotation}}
 +
{{#set: reconstruction source=esub_adding_annot_form}}

Latest revision as of 19:41, 17 March 2021

Reaction ALLANTOINASE-RXN

  • direction:
    • left-to-right
  • ec_number:
    • ec-3.5.2.5

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing):
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5698, allantoin degradation to ureidoglycolate II (ammonia producing):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links