Difference between revisions of "Annotation"

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(Created page with "Category:reaction == Reaction RXN-1404 == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right == Reaction formula == * 1 INDOL...")
(Created page with "Category:metabolite == Metabolite CPD-4702 == * common-name: ** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol * inchi-key: ** jhiwifrqjxlneu-gsqagghasa-m * molec...")
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction RXN-1404 ==
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== Metabolite CPD-4702 ==
* ec-number:
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* common-name:
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
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** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
* direction:
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* inchi-key:
** left-to-right
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** jhiwifrqjxlneu-gsqagghasa-m
== Reaction formula ==
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* molecular-weight:
* 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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** 427.646
== Gene(s) associated with this reaction  ==
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* smiles:
* Gene: [[E_subulatus_21609]]
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** cc(c)=ccc[c@@h](c)[c@h]2(cc[c@h]3(c4(\cc[c@h]1([c@h](c([o-])=o)[c@@h](o)cc[c@@](c)1c(\cc[c@](c)23)=4))))
** Category: [[orthology]]
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== Reaction(s) known to consume the compound ==
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN66-318]]
== Pathway(s) ==
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== Reaction(s) known to produce the compound ==
* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack):
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* [[RXN-13709]]
** '''1''' reactions found over '''13''' reactions in the full pathway
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== Reaction(s) of unknown directionality ==
* [[PWY-581]], indole-3-acetate biosynthesis II:
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{{#set: common-name=4α-carboxy-5α-cholesta-8,24-dien-3β-ol}}
** '''2''' reactions found over '''12''' reactions in the full pathway
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{{#set: inchi-key=inchikey=jhiwifrqjxlneu-gsqagghasa-m}}
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi):
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{{#set: molecular-weight=427.646}}
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
* METANETX-RXN : MNXR102070
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
 
{{#set: ec-number=ec-3.5.5.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_a.taliana.aragem}}
 

Revision as of 19:04, 17 March 2021

Metabolite CPD-4702

  • common-name:
    • 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
  • inchi-key:
    • jhiwifrqjxlneu-gsqagghasa-m
  • molecular-weight:
    • 427.646
  • smiles:
    • cc(c)=ccc[c@@h](c)[c@h]2(cc[c@h]3(c4(\cc[c@h]1([c@h](c([o-])=o)[c@@h](o)cc[c@@](c)1c(\cc[c@](c)23)=4))))

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality