Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERVAL-RXN"

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(Created page with "Category:reaction == Reaction GCVT-RXN == * common-name: ** aminomethyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1.2.10] * direction: ** rever...")
 
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN == * common-name: ** valine transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GCVT-RXN ==
+
== Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN ==
 
* common-name:
 
* common-name:
−
** aminomethyltransferase
+
** valine transaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1.2.10]
+
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[VAL]][c] '''<=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_02309]]
+
* Gene: [[E_subulatus_14599]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02306]]
+
* Gene: [[E_subulatus_00115]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02307]]
+
* Gene: [[E_subulatus_14596]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02310]]
+
* Gene: [[E_subulatus_14600]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_02308]]
+
* Gene: [[E_subulatus_14595]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_14594]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5057]], L-valine degradation II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[VALSYN-PWY]], L-valine biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[VALDEG-PWY]], L-valine degradation I:
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR96230
−
* ID : P28337
+
* RHEA:
−
{{#set: common-name=aminomethyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24816 24816]
−
{{#set: ec-number=ec-2.1.2.10}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
 +
** [http://www.uniprot.org/uniprot/P38891 P38891]
 +
** [http://www.uniprot.org/uniprot/P47176 P47176]
 +
** [http://www.uniprot.org/uniprot/O86505 O86505]
 +
** [http://www.uniprot.org/uniprot/O14370 O14370]
 +
** [http://www.uniprot.org/uniprot/O32954 O32954]
 +
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 +
{{#set: common-name=valine transaminase}}
 +
{{#set: ec-number=ec-2.6.1.42}}
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}
 
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:40, 17 March 2021

Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN

  • common-name:
    • valine transaminase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ALANINE-VALINESYN-PWY, L-alanine biosynthesis I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5057, L-valine degradation II:
    • 1 reactions found over 3 reactions in the full pathway
  • VALSYN-PWY, L-valine biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway
  • VALDEG-PWY, L-valine degradation I:
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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