Difference between revisions of "Category:Gene"
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(Created page with "Category:reaction == Reaction 1.8.5.1-RXN == * common-name: ** dehydroascorbate reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.8.5.1 ec-1.8.5.1] * direction: **...") |
(Created page with "Category:reaction == Reaction GLURS-RXN == * common-name: ** glutamate—trna ligase ** glutamate-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.17 ec-...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction GLURS-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** glutamate—trna ligase |
+ | ** glutamate-trna ligase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/6.1.1.17 ec-6.1.1.17] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[E_subulatus_12907]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_17390]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[E_subulatus_05367]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_07606]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_07603]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_07604]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_12906]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_13619]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_12908]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_07605]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[TRNA-CHARGING-PWY]], tRNA charging: |
− | ** ''' | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): |
− | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * METANETX-RXN : MNXR115926 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23541 23541] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P47700 P47700] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O52914 O52914] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P43818 P43818] |
− | {{#set: ec-number=ec-1. | + | ** [http://www.uniprot.org/uniprot/O26157 O26157] |
+ | ** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1] | ||
+ | ** [http://www.uniprot.org/uniprot/O25360 O25360] | ||
+ | ** [http://www.uniprot.org/uniprot/O51345 O51345] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3] | ||
+ | ** [http://www.uniprot.org/uniprot/P96551 P96551] | ||
+ | ** [http://www.uniprot.org/uniprot/O67271 O67271] | ||
+ | ** [http://www.uniprot.org/uniprot/O83679 O83679] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7] | ||
+ | ** [http://www.uniprot.org/uniprot/O84451 O84451] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X172 Q9X172] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58772 Q58772] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8] | ||
+ | ** [http://www.uniprot.org/uniprot/P59690 P59690] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43768 Q43768] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43794 Q43794] | ||
+ | ** [http://www.uniprot.org/uniprot/P46655 P46655] | ||
+ | ** [http://www.uniprot.org/uniprot/P48525 P48525] | ||
+ | ** [http://www.uniprot.org/uniprot/P75114 P75114] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49061 Q49061] | ||
+ | ** [http://www.uniprot.org/uniprot/P22249 P22249] | ||
+ | ** [http://www.uniprot.org/uniprot/P22250 P22250] | ||
+ | ** [http://www.uniprot.org/uniprot/P04805 P04805] | ||
+ | ** [http://www.uniprot.org/uniprot/P07814 P07814] | ||
+ | ** [http://www.uniprot.org/uniprot/P15189 P15189] | ||
+ | ** [http://www.uniprot.org/uniprot/O65253 O65253] | ||
+ | ** [http://www.uniprot.org/uniprot/O68055 O68055] | ||
+ | ** [http://www.uniprot.org/uniprot/O68142 O68142] | ||
+ | ** [http://www.uniprot.org/uniprot/O86528 O86528] | ||
+ | ** [http://www.uniprot.org/uniprot/O13775 O13775] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3] | ||
+ | ** [http://www.uniprot.org/uniprot/O82462 O82462] | ||
+ | </div> | ||
+ | {{#set: common-name=glutamate-trna ligase|glutamate—trna ligase}} | ||
+ | {{#set: ec-number=ec-6.1.1.17}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=10}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} |
Revision as of 19:04, 17 March 2021
Contents
Reaction GLURS-RXN
- common-name:
- glutamate—trna ligase
- glutamate-trna ligase
- ec-number:
- direction:
- left-to-right
Reaction formula
Gene(s) associated with this reaction
- Gene: E_subulatus_12907
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17390
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: E_subulatus_05367
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_07606
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_07603
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_07604
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12906
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_13619
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_12908
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_07605
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR115926
- RHEA:
- LIGAND-RXN:
- UNIPROT:
Pages in category "Gene"
The following 200 pages are in this category, out of 5,050 total.
(previous page) (next page)E
- E subulatus 04266
- EsuBft131 17a
- EsuBft2413 3a
- E subulatus 04983
- E subulatus 16682
- E subulatus 24709
- EsuBft89 4a
- E subulatus 19388
- E subulatus 00420
- E subulatus 13559
- E subulatus 15007
- E subulatus 01091
- E subulatus 07047
- E subulatus 17383
- E subulatus 00063
- E subulatus 01375
- E subulatus 10054
- EsuBft804 24a
- E subulatus 00738
- E subulatus 17539
- E subulatus 01179
- E subulatus 25493
- E subulatus 08391
- E subulatus 00097
- E subulatus 10289
- E subulatus 11194
- E subulatus 08001
- E subulatus 07278
- E subulatus 06602
- E subulatus 12508
- E subulatus 06211
- E subulatus 12453
- E subulatus 23575
- E subulatus 12033
- E subulatus 00712
- E subulatus 07472
- E subulatus 04562
- E subulatus 23762
- E subulatus 13868
- E subulatus 05705
- E subulatus 14300
- E subulatus 01574
- E subulatus 21382
- E subulatus 25497
- E subulatus 05033
- E subulatus 09693
- E subulatus 18066
- E subulatus 11708
- E subulatus 06472
- EsuBft172 11a
- E subulatus 13016
- E subulatus 25663
- E subulatus 04998
- E subulatus 19760
- E subulatus 03322
- E subulatus 10025
- E subulatus 05449
- E subulatus 07293
- E subulatus 13923
- E subulatus 18261
- E subulatus 14403
- E subulatus 20897
- E subulatus 08836
- EsuBft126 5a
- EsuBft866 4a
- E subulatus 25604
- E subulatus 16030
- E subulatus 00230
- E subulatus 04739
- E subulatus 02069
- E subulatus 18302
- E subulatus 19464
- E subulatus 09037
- E subulatus 14739
- E subulatus 22846
- EsuBft2894 3a
- E subulatus 03679
- E subulatus 18588
- E subulatus 00378
- E subulatus 14005
- E subulatus 20483
- E subulatus 11172
- E subulatus 13182
- E subulatus 13687
- E subulatus 14402
- E subulatus 03928
- E subulatus 21909
- E subulatus 01837
- E subulatus 16239
- E subulatus 08744
- E subulatus 14790
- E subulatus 04429
- E subulatus 19370
- EsuBft2326 4a
- E subulatus 00713
- E subulatus 06811
- E subulatus 18042
- E subulatus 16548
- E subulatus 21360
- E subulatus 01628
- E subulatus 18393
- EsuBft491 2a
- E subulatus 21941
- E subulatus 03118
- E subulatus 24824
- E subulatus 18752
- E subulatus 24816
- E subulatus 23466
- E subulatus 00121
- E subulatus 02089
- E subulatus 19687
- E subulatus 15745
- E subulatus 12595
- E subulatus 23242
- E subulatus 23243
- E subulatus 22809
- E subulatus 23408
- E subulatus 01046
- E subulatus 21544
- E subulatus 09385
- E subulatus 09220
- E subulatus 17397
- E subulatus 12721
- E subulatus 23844
- E subulatus 16792
- E subulatus 07329
- E subulatus 09462
- E subulatus 00789
- E subulatus 07093
- E subulatus 25335
- E subulatus 21221
- E subulatus 08565
- E subulatus 21395
- E subulatus 05916
- E subulatus 07151
- E subulatus 09249
- E subulatus 01825
- E subulatus 23018
- E subulatus 21877
- E subulatus 20870
- E subulatus 22739
- E subulatus 10953
- E subulatus 09794
- E subulatus 05888
- E subulatus 01627
- E subulatus 15743
- E subulatus 17393
- E subulatus 21391
- E subulatus 04354
- E subulatus 06531
- E subulatus 14195
- E subulatus 12209
- E subulatus 04784
- E subulatus 23650
- E subulatus 18188
- E subulatus 02631
- E subulatus 03455
- E subulatus 13416
- E subulatus 22008
- E subulatus 06005
- E subulatus 19099
- E subulatus 09386
- E subulatus 22705
- E subulatus 21463
- E subulatus 00884
- E subulatus 05076
- E subulatus 11697
- E subulatus 04549
- E subulatus 13721
- E subulatus 17481
- E subulatus 13619
- E subulatus 25436
- E subulatus 23093
- E subulatus 06197
- EsuBft396 17a
- EsuBft708 8a
- E subulatus 24226
- E subulatus 20604
- E subulatus 19893
- E subulatus 16325
- E subulatus 11806
- E subulatus 03532
- E subulatus 21581
- E subulatus 25445
- E subulatus 06485
- E subulatus 12766
- E subulatus 20728
- E subulatus 23980
- E subulatus 23250
- E subulatus 05630
- E subulatus 24610
- E subulatus 20327
- E subulatus 11225
- E subulatus 15008
- E subulatus 21634
- E subulatus 02592
- E subulatus 20711
- E subulatus 09253
- E subulatus 09792
- E subulatus 03343