Difference between revisions of "DUDPKIN-RXN"
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(Created page with "Category:reaction == Reaction BETA-UREIDOPROPIONASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.6 ec-3.5.1.6] * direction: ** left-to-right == Reaction formu...") |
(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * common-name: ** α-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22] * direction...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ALPHAGALACTOSID-RXN == |
+ | * common-name: | ||
+ | ** α-galactosidase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_20390]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_01137]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_17187]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY0-1301]], melibiose degradation: |
− | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * METANETX-RXN : MNXR138470 | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101] | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P16551 P16551] |
− | {{#set: ec-number=ec-3. | + | ** [http://www.uniprot.org/uniprot/P27756 P27756] |
+ | ** [http://www.uniprot.org/uniprot/P04824 P04824] | ||
+ | ** [http://www.uniprot.org/uniprot/P06720 P06720] | ||
+ | ** [http://www.uniprot.org/uniprot/P06280 P06280] | ||
+ | ** [http://www.uniprot.org/uniprot/P51569 P51569] | ||
+ | ** [http://www.uniprot.org/uniprot/O93816 O93816] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03647 Q03647] | ||
+ | ** [http://www.uniprot.org/uniprot/P14749 P14749] | ||
+ | ** [http://www.uniprot.org/uniprot/P28351 P28351] | ||
+ | ** [http://www.uniprot.org/uniprot/P43467 P43467] | ||
+ | ** [http://www.uniprot.org/uniprot/Q99172 Q99172] | ||
+ | ** [http://www.uniprot.org/uniprot/P41945 P41945] | ||
+ | ** [http://www.uniprot.org/uniprot/P41946 P41946] | ||
+ | ** [http://www.uniprot.org/uniprot/P41947 P41947] | ||
+ | ** [http://www.uniprot.org/uniprot/Q92457 Q92457] | ||
+ | ** [http://www.uniprot.org/uniprot/Q92456 Q92456] | ||
+ | ** [http://www.uniprot.org/uniprot/Q92451 Q92451] | ||
+ | ** [http://www.uniprot.org/uniprot/O04943 O04943] | ||
+ | ** [http://www.uniprot.org/uniprot/O04944 O04944] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39811 Q39811] | ||
+ | ** [http://www.uniprot.org/uniprot/Q41100 Q41100] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42656 Q42656] | ||
+ | </div> | ||
+ | {{#set: common-name=α-galactosidase}} | ||
+ | {{#set: ec-number=ec-3.2.1.22}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_a.taliana.aragem}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 19:08, 17 March 2021
Contents
Reaction ALPHAGALACTOSID-RXN
- common-name:
- α-galactosidase
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 MELIBIOSE[c] + 1 WATER[c] => 1 D-galactopyranose[c] + 1 Glucopyranose[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_20390
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_01137
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_17187
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY0-1301, melibiose degradation:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links