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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction DUDPKIN-RXN == | + | == Reaction L-ASPARTATE-OXID-RXN == |
| − | * common-name:
| |
| − | ** dudp kinase
| |
| − | ** nucleoside diphosphate kinase
| |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
| |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| | + | * ec_number: |
| | + | ** ec-1.4.3.16 |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[ATP]][c] '''+''' 1 [[DUDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c] | + | * 1 [[L-ASPARTATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * Gene: [[E_subulatus_17018]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17017]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_23205]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19894]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11362]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03750]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13578]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17015]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03562]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13580]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03751]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19892]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03563]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_19893]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03752]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11039]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11037]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11363]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11361]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[E_subulatus_11038]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13577]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_15295]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_24493]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_03631]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_17016]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[E_subulatus_13579]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[E_subulatus_25805]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * 1 [[L-ASPARTATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c] |
| − | ** '''12''' reactions found over '''13''' reactions in the full pathway | + | ** '''5''' reactions found over '''9''' reactions in the full pathway |
| − | ** '''12''' reactions found over '''13''' reactions in the full pathway | + | ** '''5''' reactions found over '''9''' reactions in the full pathway |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway | + | ** '''3''' reactions found over '''9''' reactions in the full pathway |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation |
| − | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | * DB : LIGAND-RXN | + | * DB : RHEA |
| − | * ID : R02331 | + | * ID : 25876 |
| − | {{#set: common-name=dudp kinase|nucleoside diphosphate kinase}}
| |
| − | {{#set: ec-number=ec-2.7.4.6}}
| |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: nb gene associated=27}} | + | {{#set: ec_number=ec-1.4.3.16}} |
| | + | {{#set: nb gene associated=0}} |
| | {{#set: nb pathway associated=3}} | | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category=annotation|orthology}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: reconstruction tool=pathwaytools|pantograph}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction comment=annotation}} |
| − | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} | + | {{#set: reconstruction source=esub_adding_annot_form}} |
