GDPKIN-RXN

Reaction GDPKIN-RXN

• common-name:
  • gdp kinase
  • nucleoside diphosphate kinase
• ec-number:
  • ec-2.7.4.6
• direction:
  • left-to-right

Reaction formula

• 1 ATP[c] + 1 GDP[c] => 1 ADP[c] + 1 GTP[c]

Gene(s) associated with this reaction

• Gene: E_subulatus_11037
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_19893
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_03752
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_11363
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_17017
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_03631
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_13580
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_11038
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_11362
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_24493
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_19894
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_17018
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_03750
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: E_subulatus_11039
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_17016
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_03562
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_03563
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_15295
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_13578
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_23205
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: E_subulatus_17015
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_19892
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_25805
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: E_subulatus_13577
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_11361
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: E_subulatus_13579
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: E_subulatus_03751
  • Category: annotation
    • Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a

Pathway(s)

• PPGPPMET-PWY, ppGpp metabolism:
  • 3 reactions found over 6 reactions in the full pathway
• PWY-7221, guanosine ribonucleotides de novo biosynthesis:
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
• category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a

External links

• METANETX-RXN : MNXR96119
• RHEA:
  • 27687
• LIGAND-RXN:
  • R00330