Difference between revisions of "GLURS-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite CPD-8121 == * common-name: ** icosatetraenoate * molecular-weight: ** 303.464 * inchi-key: ** hqpcsdadvlfhho-ltkcoykysa-m * smiles: ** cc...")
 
(Created page with "Category:reaction == Reaction GLURS-RXN == * common-name: ** glutamate—trna ligase ** glutamate-trna ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.17 ec-...")
 
(3 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:reaction]]
−
== Metabolite CPD-8121 ==
+
== Reaction GLURS-RXN ==
 
* common-name:
 
* common-name:
−
** icosatetraenoate
+
** glutamate—trna ligase
−
* molecular-weight:
+
** glutamate-trna ligase
−
** 303.464
+
* ec-number:
−
* inchi-key:
+
** [http://enzyme.expasy.org/EC/6.1.1.17 ec-6.1.1.17]
−
** hqpcsdadvlfhho-ltkcoykysa-m
+
* direction:
−
* smiles:
+
** left-to-right
−
** ccc=ccc=ccc=ccc=cccccccc([o-])=o
+
== Reaction formula ==
−
== Reaction(s) known to consume the compound ==
+
* 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[PPI]][c]
−
* [[RXN-8349_PLANTCYC]]
+
== Gene(s) associated with this reaction  ==
−
== Reaction(s) known to produce the compound ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[RXN-8349_PLANTCYC]]
+
* Gene: [[E_subulatus_12907]]
−
== Reaction(s) of unknown directionality ==
+
** Category: [[annotation]]
−
{{#set: common-name=icosatetraenoate}}
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: molecular-weight=303.464}}
+
* Gene: [[E_subulatus_17390]]
−
{{#set: inchi-key=inchikey=hqpcsdadvlfhho-ltkcoykysa-m}}
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_05367]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07606]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07603]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07604]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12906]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13619]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_12908]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07605]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 +
== Pathway(s) ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging:
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR115926
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23541 23541]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P47700 P47700]
 +
** [http://www.uniprot.org/uniprot/O52914 O52914]
 +
** [http://www.uniprot.org/uniprot/P43818 P43818]
 +
** [http://www.uniprot.org/uniprot/O26157 O26157]
 +
** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
 +
** [http://www.uniprot.org/uniprot/O25360 O25360]
 +
** [http://www.uniprot.org/uniprot/O51345 O51345]
 +
** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
 +
** [http://www.uniprot.org/uniprot/P96551 P96551]
 +
** [http://www.uniprot.org/uniprot/O67271 O67271]
 +
** [http://www.uniprot.org/uniprot/O83679 O83679]
 +
** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
 +
** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
 +
** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
 +
** [http://www.uniprot.org/uniprot/O84451 O84451]
 +
** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
 +
** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
 +
** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
 +
** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
 +
** [http://www.uniprot.org/uniprot/Q58772 Q58772]
 +
** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
 +
** [http://www.uniprot.org/uniprot/P59690 P59690]
 +
** [http://www.uniprot.org/uniprot/Q43768 Q43768]
 +
** [http://www.uniprot.org/uniprot/Q43794 Q43794]
 +
** [http://www.uniprot.org/uniprot/P46655 P46655]
 +
** [http://www.uniprot.org/uniprot/P48525 P48525]
 +
** [http://www.uniprot.org/uniprot/P75114 P75114]
 +
** [http://www.uniprot.org/uniprot/Q49061 Q49061]
 +
** [http://www.uniprot.org/uniprot/P22249 P22249]
 +
** [http://www.uniprot.org/uniprot/P22250 P22250]
 +
** [http://www.uniprot.org/uniprot/P04805 P04805]
 +
** [http://www.uniprot.org/uniprot/P07814 P07814]
 +
** [http://www.uniprot.org/uniprot/P15189 P15189]
 +
** [http://www.uniprot.org/uniprot/O65253 O65253]
 +
** [http://www.uniprot.org/uniprot/O68055 O68055]
 +
** [http://www.uniprot.org/uniprot/O68142 O68142]
 +
** [http://www.uniprot.org/uniprot/O86528 O86528]
 +
** [http://www.uniprot.org/uniprot/O13775 O13775]
 +
** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
 +
** [http://www.uniprot.org/uniprot/O82462 O82462]
 +
</div>
 +
{{#set: common-name=glutamate-trna ligase|glutamate&mdash;trna ligase}}
 +
{{#set: ec-number=ec-6.1.1.17}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=10}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:37, 17 March 2021

Reaction GLURS-RXN

  • common-name:
    • glutamate—trna ligase
    • glutamate-trna ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=GLURS-RXN&oldid=50464"