Difference between revisions of "GLUTAMINESYN-RXN"

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(Created page with "Category:reaction == Reaction ACSERLY-RXN == * common-name: ** o-acetylserine sulfhydrylase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.47 ec-2.5.1.47] * direction:...")
(Created page with "Category:reaction == Reaction GLUTAMINESYN-RXN == * common-name: ** glutamine synthetase ** glutamate-ammonia ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.1.2 e...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACSERLY-RXN ==
+
== Reaction GLUTAMINESYN-RXN ==
 
* common-name:
 
* common-name:
−
** o-acetylserine sulfhydrylase
+
** glutamine synthetase
 +
** glutamate-ammonia ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.47 ec-2.5.1.47]
+
** [http://enzyme.expasy.org/EC/6.3.1.2 ec-6.3.1.2]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* synonymous:
 +
** type i glutamate--ammonia ligase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYLSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_00981]]
+
* Gene: [[E_subulatus_20186]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06196]]
+
* Gene: [[E_subulatus_12331]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06191]]
+
* Gene: [[E_subulatus_05757]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_06197]]
+
* Gene: [[E_subulatus_12329]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06194]]
+
* Gene: [[E_subulatus_20185]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06192]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_12328]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06193]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_12330]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_06195]]
+
* Gene: [[E_subulatus_05756]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I:
+
* [[GLNSYN-PWY]], L-glutamine biosynthesis I:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6963]], ammonia assimilation cycle I:
 +
** '''4''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-381]], nitrate reduction II (assimilatory):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5675]], nitrate reduction V (assimilatory):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY490-3]], nitrate reduction VI (assimilatory):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6964]], ammonia assimilation cycle II:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR97007
+
* METANETX-RXN : MNXR100024
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14832 14832]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00897 R00897]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00253 R00253]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31300 P31300]
+
** [http://www.uniprot.org/uniprot/P15103 P15103]
−
** [http://www.uniprot.org/uniprot/Q43153 Q43153]
+
** [http://www.uniprot.org/uniprot/P15124 P15124]
−
** [http://www.uniprot.org/uniprot/O67507 O67507]
+
** [http://www.uniprot.org/uniprot/P15623 P15623]
−
** [http://www.uniprot.org/uniprot/P47998 P47998]
+
** [http://www.uniprot.org/uniprot/P21154 P21154]
−
** [http://www.uniprot.org/uniprot/Q9V1Q3 Q9V1Q3]
+
** [http://www.uniprot.org/uniprot/P45627 P45627]
−
** [http://www.uniprot.org/uniprot/Q9RW80 Q9RW80]
+
** [http://www.uniprot.org/uniprot/Q59982 Q59982]
−
** [http://www.uniprot.org/uniprot/P56067 P56067]
+
** [http://www.uniprot.org/uniprot/Q7M314 Q7M314]
−
** [http://www.uniprot.org/uniprot/P63873 P63873]
+
** [http://www.uniprot.org/uniprot/Q60182 Q60182]
−
** [http://www.uniprot.org/uniprot/Q9CI26 Q9CI26]
+
** [http://www.uniprot.org/uniprot/P04078 P04078]
−
** [http://www.uniprot.org/uniprot/Q9ZMW6 Q9ZMW6]
+
** [http://www.uniprot.org/uniprot/P00964 P00964]
−
** [http://www.uniprot.org/uniprot/P45040 P45040]
+
** [http://www.uniprot.org/uniprot/P22248 P22248]
−
** [http://www.uniprot.org/uniprot/Q9WZD3 Q9WZD3]
+
** [http://www.uniprot.org/uniprot/P07804 P07804]
−
** [http://www.uniprot.org/uniprot/Q9CHF0 Q9CHF0]
+
** [http://www.uniprot.org/uniprot/P13564 P13564]
−
** [http://www.uniprot.org/uniprot/P0A534 P0A534]
+
** [http://www.uniprot.org/uniprot/P12425 P12425]
−
** [http://www.uniprot.org/uniprot/P71128 P71128]
+
** [http://www.uniprot.org/uniprot/P19064 P19064]
−
** [http://www.uniprot.org/uniprot/O05393 O05393]
+
** [http://www.uniprot.org/uniprot/P16580 P16580]
−
** [http://www.uniprot.org/uniprot/O34476 O34476]
+
** [http://www.uniprot.org/uniprot/P10656 P10656]
−
** [http://www.uniprot.org/uniprot/Q9JQL6 Q9JQL6]
+
** [http://www.uniprot.org/uniprot/P11600 P11600]
−
** [http://www.uniprot.org/uniprot/P38076 P38076]
+
** [http://www.uniprot.org/uniprot/P0A1P6 P0A1P6]
−
** [http://www.uniprot.org/uniprot/Q7M1J2 Q7M1J2]
+
** [http://www.uniprot.org/uniprot/P0A9C5 P0A9C5]
−
** [http://www.uniprot.org/uniprot/P29848 P29848]
+
** [http://www.uniprot.org/uniprot/P00965 P00965]
−
** [http://www.uniprot.org/uniprot/P32260 P32260]
+
** [http://www.uniprot.org/uniprot/P04771 P04771]
−
** [http://www.uniprot.org/uniprot/Q00834 Q00834]
+
** [http://www.uniprot.org/uniprot/P04770 P04770]
−
** [http://www.uniprot.org/uniprot/Q43317 Q43317]
+
** [http://www.uniprot.org/uniprot/P15102 P15102]
−
** [http://www.uniprot.org/uniprot/P47999 P47999]
+
** [http://www.uniprot.org/uniprot/P10583 P10583]
−
** [http://www.uniprot.org/uniprot/Q43726 Q43726]
+
** [http://www.uniprot.org/uniprot/P23712 P23712]
−
** [http://www.uniprot.org/uniprot/P80608 P80608]
+
** [http://www.uniprot.org/uniprot/P15105 P15105]
−
** [http://www.uniprot.org/uniprot/Q59447 Q59447]
+
** [http://www.uniprot.org/uniprot/P08282 P08282]
−
** [http://www.uniprot.org/uniprot/P53206 P53206]
+
** [http://www.uniprot.org/uniprot/P08281 P08281]
−
** [http://www.uniprot.org/uniprot/P37887 P37887]
+
** [http://www.uniprot.org/uniprot/P07694 P07694]
−
** [http://www.uniprot.org/uniprot/Q59529 Q59529]
+
** [http://www.uniprot.org/uniprot/P09606 P09606]
−
** [http://www.uniprot.org/uniprot/P0A1E3 P0A1E3]
+
** [http://www.uniprot.org/uniprot/P14654 P14654]
−
** [http://www.uniprot.org/uniprot/P0ABK5 P0ABK5]
+
** [http://www.uniprot.org/uniprot/P14655 P14655]
−
** [http://www.uniprot.org/uniprot/P16703 P16703]
+
** [http://www.uniprot.org/uniprot/P14656 P14656]
−
** [http://www.uniprot.org/uniprot/O81154 O81154]
+
** [http://www.uniprot.org/uniprot/P22878 P22878]
−
** [http://www.uniprot.org/uniprot/O81155 O81155]
+
** [http://www.uniprot.org/uniprot/P19432 P19432]
−
** [http://www.uniprot.org/uniprot/O81523 O81523]
+
** [http://www.uniprot.org/uniprot/P15106 P15106]
−
** [http://www.uniprot.org/uniprot/Q93244 Q93244]
+
** [http://www.uniprot.org/uniprot/P19904 P19904]
−
** [http://www.uniprot.org/uniprot/O45679 O45679]
+
** [http://www.uniprot.org/uniprot/P14636 P14636]
−
** [http://www.uniprot.org/uniprot/Q9S2H1 Q9S2H1]
+
** [http://www.uniprot.org/uniprot/P04772 P04772]
−
** [http://www.uniprot.org/uniprot/P87131 P87131]
+
** [http://www.uniprot.org/uniprot/P09826 P09826]
−
** [http://www.uniprot.org/uniprot/Q9XDU7 Q9XDU7]
+
** [http://www.uniprot.org/uniprot/P05457 P05457]
−
** [http://www.uniprot.org/uniprot/Q9UWP0 Q9UWP0]
+
** [http://www.uniprot.org/uniprot/Q9JSU6 Q9JSU6]
−
** [http://www.uniprot.org/uniprot/O32978 O32978]
+
** [http://www.uniprot.org/uniprot/Q9PPK8 Q9PPK8]
−
** [http://www.uniprot.org/uniprot/Q9RAS8 Q9RAS8]
+
** [http://www.uniprot.org/uniprot/O66514 O66514]
−
** [http://www.uniprot.org/uniprot/Q9S757 Q9S757]
+
** [http://www.uniprot.org/uniprot/Q8X7G0 Q8X7G0]
−
** [http://www.uniprot.org/uniprot/Q9S6Z7 Q9S6Z7]
+
** [http://www.uniprot.org/uniprot/Q9CDL9 Q9CDL9]
−
** [http://www.uniprot.org/uniprot/Q43725 Q43725]
+
** [http://www.uniprot.org/uniprot/Q05650 Q05650]
−
** [http://www.uniprot.org/uniprot/Q9SMY4 Q9SMY4]
+
** [http://www.uniprot.org/uniprot/P43794 P43794]
 +
** [http://www.uniprot.org/uniprot/P31592 P31592]
 +
** [http://www.uniprot.org/uniprot/Q27747 Q27747]
 +
** [http://www.uniprot.org/uniprot/P12424 P12424]
 +
** [http://www.uniprot.org/uniprot/Q04831 Q04831]
 +
** [http://www.uniprot.org/uniprot/P24099 P24099]
 +
** [http://www.uniprot.org/uniprot/O04998 O04998]
 +
** [http://www.uniprot.org/uniprot/O04999 O04999]
 +
** [http://www.uniprot.org/uniprot/P20479 P20479]
 +
** [http://www.uniprot.org/uniprot/O75014 O75014]
 +
** [http://www.uniprot.org/uniprot/P23794 P23794]
 +
** [http://www.uniprot.org/uniprot/Q43127 Q43127]
 +
** [http://www.uniprot.org/uniprot/Q9FHR0 Q9FHR0]
 +
** [http://www.uniprot.org/uniprot/Q9C8C7 Q9C8C7]
 +
** [http://www.uniprot.org/uniprot/P28786 P28786]
 +
** [http://www.uniprot.org/uniprot/Q02154 Q02154]
 +
** [http://www.uniprot.org/uniprot/Q05542 Q05542]
 +
** [http://www.uniprot.org/uniprot/Q42624 Q42624]
 +
** [http://www.uniprot.org/uniprot/P43518 P43518]
 +
** [http://www.uniprot.org/uniprot/P52783 P52783]
 +
** [http://www.uniprot.org/uniprot/Q43759 Q43759]
 +
** [http://www.uniprot.org/uniprot/P38559 P38559]
 +
** [http://www.uniprot.org/uniprot/P38560 P38560]
 +
** [http://www.uniprot.org/uniprot/P38561 P38561]
 +
** [http://www.uniprot.org/uniprot/P38562 P38562]
 +
** [http://www.uniprot.org/uniprot/P38563 P38563]
 +
** [http://www.uniprot.org/uniprot/P25462 P25462]
 +
** [http://www.uniprot.org/uniprot/Q42625 Q42625]
 +
** [http://www.uniprot.org/uniprot/P46410 P46410]
 +
** [http://www.uniprot.org/uniprot/Q42802 Q42802]
 +
** [http://www.uniprot.org/uniprot/Q42623 Q42623]
 +
** [http://www.uniprot.org/uniprot/Q53045 Q53045]
 +
** [http://www.uniprot.org/uniprot/P32288 P32288]
 +
** [http://www.uniprot.org/uniprot/Q43066 Q43066]
 +
** [http://www.uniprot.org/uniprot/Q59195 Q59195]
 +
** [http://www.uniprot.org/uniprot/P51118 P51118]
 +
** [http://www.uniprot.org/uniprot/P51119 P51119]
 +
** [http://www.uniprot.org/uniprot/Q42950 Q42950]
 +
** [http://www.uniprot.org/uniprot/Q42951 Q42951]
 +
** [http://www.uniprot.org/uniprot/Q07939 Q07939]
 +
** [http://www.uniprot.org/uniprot/Q43760 Q43760]
 +
** [http://www.uniprot.org/uniprot/Q42688 Q42688]
 +
** [http://www.uniprot.org/uniprot/Q42689 Q42689]
 +
** [http://www.uniprot.org/uniprot/O22504 O22504]
 +
** [http://www.uniprot.org/uniprot/O22505 O22505]
 +
** [http://www.uniprot.org/uniprot/O22506 O22506]
 +
** [http://www.uniprot.org/uniprot/Q59972 Q59972]
 +
** [http://www.uniprot.org/uniprot/Q9UWN1 Q9UWN1]
 +
** [http://www.uniprot.org/uniprot/Q9RDW7 Q9RDW7]
 +
** [http://www.uniprot.org/uniprot/P43386 P43386]
 +
** [http://www.uniprot.org/uniprot/P0A040 P0A040]
 
</div>
 
</div>
−
{{#set: common-name=o-acetylserine sulfhydrylase}}
+
{{#set: common-name=glutamate-ammonia ligase|glutamine synthetase}}
−
{{#set: ec-number=ec-2.5.1.47}}
+
{{#set: ec-number=ec-6.3.1.2}}
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
 +
{{#set: synonymous=type i glutamate--ammonia ligase}}
 
{{#set: nb gene associated=8}}
 
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:39, 17 March 2021

Reaction GLUTAMINESYN-RXN

  • common-name:
    • glutamine synthetase
    • glutamate-ammonia ligase
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • type i glutamate--ammonia ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLNSYN-PWY, L-glutamine biosynthesis I:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6963, ammonia assimilation cycle I:
    • 4 reactions found over 2 reactions in the full pathway
  • PWY-381, nitrate reduction II (assimilatory):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory):
    • 4 reactions found over 4 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6964, ammonia assimilation cycle II:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.genouest.org//esubgem/index.php?title=GLUTAMINESYN-RXN&oldid=51551"