Difference between revisions of "PEPCARBOXYKIN-RXN"

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(Created page with "Category:reaction == Reaction 2.1.1.135-RXN == * common-name: ** methionine synthase reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.16.1.8 ec-1.16.1.8] * directi...")
(Created page with "Category:reaction == Reaction PEPCARBOXYKIN-RXN == * common-name: ** phosphoenolpyruvate carboxykinase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.1.1.135-RXN ==
+
== Reaction PEPCARBOXYKIN-RXN ==
 
* common-name:
 
* common-name:
−
** methionine synthase reductase
+
** phosphoenolpyruvate carboxykinase (atp)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.16.1.8 ec-1.16.1.8]
+
** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1.49]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[Methionine-synthase-cob-II-alamins]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[ADENOSYL-HOMO-CYS]][c] '''+''' 2 [[METHIONINE-SYNTHASE-METHYLCOBALAMIN]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_10031]]
+
* Gene: [[E_subulatus_03443]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_16914]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_03444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7974]], cobalamin salvage (eukaryotic):
+
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation:
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I:
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103099
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18618 18618]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05182 R05182]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
−
* METANETX-RXN : MNXR109379
+
* UNIPROT:
−
{{#set: common-name=methionine synthase reductase}}
+
** [http://www.uniprot.org/uniprot/P10963 P10963]
−
{{#set: ec-number=ec-1.16.1.8}}
+
** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
 +
** [http://www.uniprot.org/uniprot/P43923 P43923]
 +
** [http://www.uniprot.org/uniprot/P22259 P22259]
 +
** [http://www.uniprot.org/uniprot/P42066 P42066]
 +
** [http://www.uniprot.org/uniprot/P49292 P49292]
 +
** [http://www.uniprot.org/uniprot/O49547 O49547]
 +
** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
 +
** [http://www.uniprot.org/uniprot/Q39294 Q39294]
 +
** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
 +
{{#set: common-name=phosphoenolpyruvate carboxykinase (atp)}}
 +
{{#set: ec-number=ec-4.1.1.49}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction PEPCARBOXYKIN-RXN

  • common-name:
    • phosphoenolpyruvate carboxykinase (atp)
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 9 reactions found over 14 reactions in the full pathway
  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation:
    • 6 reactions found over 4 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I:
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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